Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.4e-111 406.4 209 100.0
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 3.6e-64 248.8 170 74.7
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 2.0e-62 243.0 172 73.8
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 2.6e-62 242.7 170 71.2
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 2.6e-62 242.7 170 71.2
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 8.3e-61 237.7 170 72.4
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 1.3e-58 230.3 171 65.5
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 2.3e-58 229.6 170 66.5
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.1e-55 220.7 170 62.9
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 3.1e-55 219.2 168 64.9
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 5.2e-55 218.4 170 64.1
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.6e-54 216.1 168 63.1
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 3.4e-54 215.7 168 64.3
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 4.4e-54 215.3 171 64.9
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 4.4e-54 215.3 168 63.1
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 7.5e-54 214.5 162 67.9
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.9e-52 209.9 162 66.0
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 7.1e-52 208.0 171 61.4
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 9.2e-52 207.6 169 60.4
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 2.7e-51 206.1 171 61.4
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 2.7e-51 206.1 142 70.4
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 6.0e-51 204.9 164 61.0
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 6.0e-51 204.9 168 60.7
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 7.8e-51 204.5 165 62.4
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.3e-50 203.8 170 58.8
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.0e-50 202.6 171 55.6
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 3.0e-50 202.6 171 55.6
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 5.1e-50 201.8 171 55.0
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 5.1e-50 201.8 170 60.6
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 3.3e-49 199.1 167 60.5
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 7.3e-49 198.0 148 65.5
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 9.5e-49 197.6 174 60.9
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 9.5e-49 197.6 174 57.5
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 2.1e-48 196.4 165 60.6
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 2.8e-48 196.1 165 63.6
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 4.7e-48 195.3 164 57.3
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 4.7e-48 195.3 171 53.8
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 8.1e-48 194.5 172 58.7
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 8.1e-48 194.5 168 59.5
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 8.1e-48 194.5 139 65.5
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.8e-47 193.4 185 55.7
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.1e-47 192.6 168 59.5
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 4.0e-47 192.2 168 57.1
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 5.2e-47 191.8 164 58.5
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 5.2e-47 191.8 168 58.9
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 6.8e-47 191.4 171 56.1
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.2e-46 190.7 168 58.9
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 1.2e-46 190.7 172 58.7
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 4.4e-46 188.7 168 57.1
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 9.9e-46 187.6 172 57.6
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 2.2e-45 186.4 164 56.7
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 2.2e-45 186.4 133 66.2
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.8e-45 185.7 161 59.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 3.8e-45 185.7 168 57.1
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 4.9e-45 185.3 136 64.0
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 8.4e-45 184.5 168 58.3
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.1e-44 184.1 174 52.9
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 9.2e-44 181.0 164 57.3
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.2e-43 180.6 139 66.2
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.6e-43 180.3 172 57.6
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.7e-43 179.5 140 62.9
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.5e-43 179.1 142 62.7
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 3.5e-43 179.1 164 55.5
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 7.8e-43 177.9 207 47.3
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.0e-42 177.6 177 53.1
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.3e-42 177.2 170 54.7
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 6.6e-42 174.9 134 63.4
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.9e-41 173.3 169 54.4
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 2.2e-37 159.8 117 68.4
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.3e-34 150.6 171 49.7
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 2.3e-34 149.8 168 49.4
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 8.7e-34 147.9 168 49.4
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.5e-33 147.1 131 57.3
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 2.5e-33 146.4 140 54.3
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 4.3e-33 145.6 149 51.0
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 3.6e-32 142.5 133 52.6
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 3.1e-31 139.4 167 46.1
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 3.1e-31 139.4 133 52.6
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 8.4e-29 131.3 131 54.2
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 1.1e-28 131.0 161 45.3
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.4e-28 130.6 155 43.9
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 2.4e-28 129.8 167 44.3
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 2.4e-28 129.8 140 49.3
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 3.2e-28 129.4 147 48.3
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 5.4e-28 128.6 174 43.1
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 7.1e-28 128.3 170 45.9
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 2.1e-27 126.7 166 44.6
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.5e-27 125.9 111 55.0
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 6.0e-27 125.2 148 48.0
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.0e-26 124.4 145 49.0
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.8e-26 123.6 148 48.6
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.8e-26 123.6 148 48.6
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 8.7e-26 121.3 177 41.2
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 5.3e-23 112.1 182 35.2
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.2e-22 110.9 78 70.5
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 2.2e-21 106.7 121 47.9
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 1.2e-19 100.9 173 37.0
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 5.7e-17 92.0 146 34.2
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.8e-16 89.7 147 40.1
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 8.2e-16 88.2 145 40.0
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 2.4e-15 86.7 120 40.0
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 9.0e-15 84.7 200 28.0
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 3.4e-06 56.2 45 55.6


User provided reference genes

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