Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 3.9e-83 311.6 178 100.0
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 2.6e-55 219.2 176 72.2
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 3.8e-54 215.3 183 65.0
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 4.2e-53 211.8 187 64.7
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 1.9e-50 203.0 179 67.0
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 9.6e-50 200.7 178 70.8
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 1.3e-49 200.3 206 62.1
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 2.8e-49 199.1 183 59.6
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 4.8e-49 198.4 180 64.4
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 4.8e-49 198.4 184 60.3
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 1.3e-46 190.3 180 63.3
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 4.9e-46 188.3 184 61.4
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 1.4e-45 186.8 189 58.7
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 5.5e-45 184.9 181 57.5
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 2.7e-44 182.6 180 60.6
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 3.5e-44 182.2 174 56.9
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 6.0e-44 181.4 183 57.9
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 7.9e-44 181.0 179 59.2
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 7.9e-44 181.0 178 60.1
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 1.0e-43 180.6 181 61.9
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 1.3e-43 180.3 172 61.6
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 3.0e-43 179.1 157 63.7
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.9e-43 178.7 178 54.5
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 8.7e-43 177.6 178 53.4
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 2.5e-42 176.0 180 57.2
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 4.3e-42 175.3 180 60.6
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 5.6e-42 174.9 178 59.0
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 5.6e-42 174.9 179 58.1
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 7.4e-42 174.5 179 57.5
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 9.6e-42 174.1 182 55.5
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.3e-41 173.7 182 54.9
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 2.1e-41 172.9 164 62.8
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 2.8e-41 172.6 178 52.8
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.7e-41 172.2 182 55.5
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 4.8e-41 171.8 179 56.4
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 1.1e-40 170.6 178 60.7
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 1.4e-40 170.2 178 53.4
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 3.1e-40 169.1 181 54.7
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 4.0e-40 168.7 182 59.3
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 5.3e-40 168.3 178 59.0
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 1.2e-39 167.2 180 56.7
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 2.2e-38 162.9 182 57.1
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 3.8e-38 162.2 161 59.0
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 8.4e-38 161.0 194 52.1
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 8.4e-38 161.0 162 56.8
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 2.5e-37 159.5 149 62.4
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 4.2e-37 158.7 179 49.7
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 5.5e-37 158.3 178 57.9
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 7.1e-37 157.9 182 53.3
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.3e-35 153.7 160 56.2
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 2.3e-35 152.9 212 46.7
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 3.9e-35 152.1 133 64.7
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 6.3e-33 144.8 160 50.6
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 4.1e-32 142.1 126 73.8
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.5e-31 140.2 230 47.8
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 2.6e-31 139.4 160 53.8
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 2.6e-31 139.4 160 54.4
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 4.5e-31 138.7 160 53.1
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 5.9e-31 138.3 182 48.4
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 7.6e-31 137.9 195 50.3
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 1.0e-30 137.5 114 72.8
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.7e-30 136.7 160 53.1
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 2.2e-30 136.3 127 66.1
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 5.0e-30 135.2 151 62.3
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 5.0e-30 135.2 154 55.2
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 6.5e-30 134.8 160 52.5
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 1.4e-29 133.7 152 53.3
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 1.4e-29 133.7 102 70.6
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 2.5e-29 132.9 161 50.9
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 7.2e-29 131.3 161 46.0
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 7.2e-29 131.3 151 51.0
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 1.2e-28 130.6 150 52.7
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 2.7e-28 129.4 132 58.3
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 4.6e-28 128.6 188 46.8
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 6.1e-28 128.3 186 45.7
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 6.1e-28 128.3 186 45.7
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 7.9e-28 127.9 164 49.4
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.3e-27 127.1 187 47.1
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 1.3e-27 127.1 166 57.2
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.3e-27 127.1 114 71.9
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 3.0e-27 125.9 186 45.2
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 6.7e-27 124.8 152 57.9
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 8.8e-27 124.4 181 40.3
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 8.8e-27 124.4 113 59.3
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 8.2e-25 117.9 113 56.6
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 2.4e-24 116.3 138 51.4
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 3.1e-24 115.9 103 58.3
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.7e-22 110.2 120 50.8
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 5.0e-22 108.6 133 51.1
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 1.8e-16 90.1 131 43.5
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 1.5e-15 87.0 56 78.6
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 2.6e-15 86.3 141 42.6
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 1.9e-13 80.1 56 69.6
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 5.2e-11 72.0 101 46.5
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 5.2e-11 72.0 117 40.2
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 2.6e-10 69.7 55 67.3
THA.LOC104804650 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.6e-10 69.7 97 44.3
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 2.9e-06 56.2 118 43.2


User provided reference genes

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