Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034744 Camellia sinensis var. sinensis HOM05D030077 ORTHO05D000037 9.8e-92 340.1 172 100.0
CSS0039236 Camellia sinensis var. sinensis HOM05D030077 ORTHO05D000037 1.8e-85 319.3 182 90.7
CSS0044843 Camellia sinensis var. sinensis HOM05D030077 ORTHO05D109504 1.3e-46 190.3 181 64.6
CSS0011465 Camellia sinensis var. sinensis HOM05D030077 ORTHO05D112669 1.2e-44 183.7 156 68.6
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-09 67.4 108 41.7
CSS0050094 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-09 67.0 108 41.7
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.1e-09 66.6 108 41.7
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.7e-09 65.5 108 40.7
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-08 63.9 108 40.7
PSO017G5821 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 63.9 154 35.1
PSO170G3831 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 63.9 154 35.1
CSS0044788 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-07 59.7 117 37.6
AUR62000585 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.3e-07 59.3 107 37.4
TPR.G40358 Trifolium pratense HOM05D000034 ORTHO05D000037 3.3e-07 59.3 107 36.4
Haze_19363 Corylus avellana HOM05D000034 ORTHO05D000037 4.4e-07 58.9 107 35.5
Migut.L00099 Erythranthe guttata HOM05D000034 ORTHO05D000037 7.4e-07 58.2 106 36.8
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 7.4e-07 58.2 108 36.1
AUR62006942 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.7e-07 57.8 107 36.4
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.7e-07 57.8 107 37.4
Atru.chr3.1441 Acer truncatum HOM05D000034 ORTHO05D000037 2.2e-06 56.6 107 36.4
CANSAT54G1207 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-06 56.6 107 36.4
Lj2g0010408 Lotus japonicus HOM05D000034 ORTHO05D000037 2.2e-06 56.6 107 37.4
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 2.8e-06 56.2 108 35.2
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.8e-06 56.2 101 36.6
TWI60G0087 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.8e-06 56.2 101 36.6
EL10Ac4g09713 Beta vulgaris HOM05D000034 ORTHO05D000037 3.7e-06 55.8 107 34.6
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 3.7e-06 55.8 110 34.5
PSO357G0155 Papaver somniferum HOM05D000034 ORTHO05D000037 4.8e-06 55.5 100 40.0
CSS0019129 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.3e-06 55.1 108 33.3
Hma1.2p1_0296F.1_g116800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-06 55.1 108 33.3
PSO339G2851 Papaver somniferum HOM05D000034 ORTHO05D000037 6.3e-06 55.1 98 40.8
QL10p037558 Quercus lobata HOM05D000034 ORTHO05D000037 6.3e-06 55.1 107 34.6
GSVIVG01000254001 Vitis vinifera HOM05D000034 ORTHO05D000037 6.3e-06 55.1 107 33.6
MSTRG.3282 Avicennia marina HOM05D000034 ORTHO05D001902 8.2e-06 54.7 107 36.4
CSS0013348 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.2e-06 54.7 111 32.4


User provided reference genes

Program Settings