Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.5e-125 452.2 244 100.0
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.6e-124 448.4 244 99.2
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 8.1e-100 367.5 244 82.0
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.4e-99 366.7 244 80.3
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 3.9e-94 348.6 241 79.3
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 5.1e-94 348.2 243 77.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 9.6e-93 344.0 238 78.6
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 4.8e-92 341.7 246 77.6
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 5.3e-91 338.2 240 76.2
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 6.9e-91 337.8 244 75.4
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 9.0e-91 337.4 245 75.5
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.6e-90 335.9 241 76.3
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.6e-90 335.9 241 76.3
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.4e-90 335.5 241 77.2
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.7e-89 333.2 250 74.4
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 2.2e-89 332.8 240 75.8
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 3.8e-89 332.0 248 75.0
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.9e-89 331.6 245 73.1
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 8.4e-89 330.9 241 75.5
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.4e-88 330.1 237 72.6
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.4e-88 330.1 245 72.7
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 4.2e-88 328.6 234 75.6
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 4.2e-88 328.6 245 73.5
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 2.7e-87 325.9 240 73.3
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 3.5e-87 325.5 246 70.3
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.5e-87 325.5 236 74.2
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.3e-86 323.6 245 73.9
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 3.0e-86 322.4 245 73.9
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.9e-86 322.0 247 73.7
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 5.1e-86 321.6 212 78.3
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 5.1e-86 321.6 245 72.2
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 6.7e-86 321.2 244 71.7
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 3.3e-85 318.9 225 72.0
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 4.3e-85 318.5 212 77.8
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 9.7e-85 317.4 234 73.5
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.3e-84 317.0 245 72.7
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.6e-84 316.6 243 72.8
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.2e-84 316.2 245 74.3
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 2.8e-84 315.8 207 80.2
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 3.7e-84 315.5 223 71.7
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 6.3e-84 314.7 221 73.3
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 8.2e-84 314.3 246 72.4
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 8.2e-84 314.3 244 72.1
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.1e-83 313.9 204 81.9
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 3.1e-83 312.4 227 74.0
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 6.9e-83 311.2 244 69.3
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 9.0e-83 310.8 247 67.2
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 5.9e-82 308.1 224 71.0
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 5.9e-82 308.1 231 71.0
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.3e-81 307.0 214 73.8
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.2e-81 306.2 247 66.4
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 2.2e-81 306.2 240 70.8
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 2.2e-81 306.2 208 75.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 6.5e-81 304.7 223 72.2
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 8.5e-81 304.3 237 70.0
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 8.5e-81 304.3 219 75.3
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.9e-80 303.1 246 68.3
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.2e-80 302.4 253 68.8
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 7.2e-80 301.2 208 76.0
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 9.4e-80 300.8 247 65.6
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 2.1e-79 299.7 247 65.2
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.7e-79 299.3 240 67.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.0e-78 297.4 214 72.4
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.0e-78 297.4 247 63.6
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.4e-78 297.0 246 64.2
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.8e-78 296.6 246 67.5
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 6.7e-78 294.7 225 71.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 214 71.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.9e-77 293.1 247 64.8
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 245 63.7
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 4.3e-77 292.0 214 70.6
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 5.7e-77 291.6 248 64.5
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 7.4e-77 291.2 237 67.1
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 9.7e-77 290.8 214 70.6
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 9.7e-77 290.8 245 63.3
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.3e-76 290.4 213 70.9
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.3e-76 290.4 213 70.9
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 2.2e-76 289.7 214 70.6
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 2.2e-76 289.7 214 70.1
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 3.7e-76 288.9 207 71.5
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.7e-76 288.9 225 70.2
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.4e-75 287.0 241 63.9
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.8e-75 286.6 229 67.2
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 4.5e-74 282.0 238 65.5
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.3e-73 280.4 249 63.1
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.7e-73 280.0 251 63.3
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 2.5e-72 276.2 237 64.1
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 7.2e-72 274.6 214 65.9
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 6.1e-71 271.6 233 64.4
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 6.1e-71 271.6 231 63.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 3.0e-70 269.2 234 62.4
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 3.9e-70 268.9 213 65.3
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.3e-68 263.8 174 78.7
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 2.2e-65 253.1 194 72.7
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 2.7e-63 246.1 220 59.1
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 3.0e-62 242.7 212 60.4
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.4e-59 233.8 246 60.6
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 1.7e-57 226.9 232 52.6
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 3.6e-55 219.2 206 56.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.8e-49 199.1 227 48.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 4.1e-43 179.1 157 65.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 5.9e-42 175.3 150 66.0
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.4e-37 159.1 243 42.8
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-35 154.5 99 85.9
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 4.5e-34 149.1 120 65.8
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 7.5e-29 131.7 90 76.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.0e-25 121.3 247 36.4
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.9e-24 117.1 79 79.7
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.7e-17 94.0 209 34.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 8.9e-14 81.6 156 34.6
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-11 74.7 51 74.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 3.5e-10 69.7 51 70.6
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 3.3e-08 63.2 46 71.7


User provided reference genes

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