Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.7e-246 855.5 417 100.0
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.0e-194 682.6 416 79.3
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 7.4e-194 680.6 411 80.0
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 2.9e-190 668.7 413 78.7
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.0e-179 633.6 425 72.5
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 6.7e-179 630.9 425 71.5
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.0e-178 629.4 420 71.4
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 4.4e-178 628.2 414 72.2
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 7.7e-175 617.5 414 70.8
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.7e-174 616.3 422 70.6
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 2.2e-174 615.9 417 71.0
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 7.2e-173 610.9 416 71.2
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 4.7e-172 608.2 417 67.9
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 6.1e-172 607.8 420 69.0
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 4.0e-171 605.1 418 70.3
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 4.0e-171 605.1 418 70.3
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 5.2e-171 604.7 427 69.3
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 8.8e-171 604.0 416 68.5
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.5e-170 603.2 419 69.7
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.0e-170 602.8 417 69.3
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 5.7e-170 601.3 418 67.5
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 9.8e-170 600.5 411 68.9
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 5.9e-167 591.3 410 67.3
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 3.8e-166 588.6 426 66.9
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 5.0e-166 588.2 421 65.8
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 8.5e-166 587.4 409 69.2
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 8.5e-166 587.4 417 69.5
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 9.5e-165 583.9 431 66.6
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 2.7e-164 582.4 431 65.0
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 2.3e-163 579.3 421 66.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 5.2e-163 578.2 416 67.8
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.0e-162 576.2 416 68.0
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 2.6e-162 575.9 413 65.1
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 5.7e-162 574.7 416 67.1
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 9.8e-162 573.9 413 64.9
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.3e-161 573.5 377 72.9
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 8.3e-161 570.9 420 65.0
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 1.1e-160 570.5 420 64.8
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.1e-160 570.5 429 66.7
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.1e-160 568.9 421 65.1
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.1e-160 568.9 433 66.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 5.4e-160 568.2 411 66.7
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 4.5e-159 565.1 437 63.8
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.8e-158 562.0 421 65.1
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 8.6e-158 560.8 419 64.4
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 1.5e-157 560.1 517 57.1
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 4.3e-157 558.5 419 64.2
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.1e-156 556.2 421 64.4
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.8e-155 553.1 386 67.4
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 3.0e-155 552.4 423 65.7
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.0e-155 552.0 421 64.1
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 5.7e-154 548.1 417 64.7
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 5.7e-154 548.1 417 64.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 6.4e-153 544.7 371 70.6
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.1e-152 543.9 415 64.3
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.4e-152 542.7 414 63.5
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 9.2e-152 540.8 420 64.0
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.6e-151 540.0 391 66.8
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.6e-151 538.5 416 63.2
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 5.9e-151 538.1 420 62.6
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.3e-150 536.2 417 64.3
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 3.9e-150 535.4 425 65.9
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 3.3e-149 532.3 423 64.5
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 7.3e-149 531.2 417 63.8
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.8e-148 529.3 355 71.3
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 6.2e-148 528.1 418 61.5
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 7.5e-146 521.2 415 64.3
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 6.4e-145 518.1 404 62.1
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 1.3e-142 510.4 424 59.4
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.1e-141 507.3 423 58.2
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 6.2e-140 501.5 425 59.3
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.4e-139 500.4 426 60.1
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 6.8e-139 498.0 415 58.3
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 5.4e-136 488.4 412 58.3
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.1e-135 486.5 406 58.6
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.7e-135 486.1 644 43.9
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 3.9e-134 482.3 419 57.0
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.6e-132 476.9 367 64.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 2.1e-132 476.5 414 58.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 2.3e-131 473.0 407 58.2
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 2.3e-131 473.0 407 58.2
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.2e-130 470.7 368 62.0
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.2e-130 470.7 352 64.2
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 4.4e-130 468.8 356 63.5
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 5.8e-130 468.4 406 57.6
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 2.2e-129 466.5 406 57.4
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 6.4e-129 464.9 419 57.3
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.9e-128 463.4 402 57.7
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.4e-128 463.0 406 57.4
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 3.2e-128 462.6 426 55.6
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 5.4e-128 461.8 402 57.5
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.1e-125 454.1 404 55.2
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.4e-123 447.2 302 72.5
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.3e-117 426.0 421 50.4
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 2.1e-111 406.8 303 64.4
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.1e-92 343.6 292 59.9
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.5e-74 284.3 474 35.7
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.9e-73 280.0 236 59.3
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 8.8e-70 268.5 452 37.2
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 2.4e-67 260.4 274 52.6
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.4e-62 244.6 188 63.8
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.1e-59 235.0 214 51.9
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 9.4e-56 221.9 209 53.1
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.8e-51 207.6 186 54.3
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 6.5e-49 199.1 140 67.1
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 5.5e-48 196.1 181 53.6
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.6e-39 167.9 113 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 3.6e-39 166.8 250 42.4
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.0e-39 165.6 123 65.0
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.4e-27 128.3 110 57.3
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 6.0e-18 96.3 103 47.6
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 9.5e-16 89.0 100 45.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 6.8e-14 82.8 67 61.2
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 5.8e-13 79.7 98 48.0
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 2.1e-10 71.2 198 29.8
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.1e-08 65.5 50 70.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 3.3e-08 63.9 221 28.5
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 8.1e-07 59.3 51 54.9


User provided reference genes

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