Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 3.3e-95 351.7 174 100.0
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.5e-74 282.3 155 90.3
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.2e-57 226.9 160 73.8
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 2.6e-52 209.1 142 74.6
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 2.6e-52 209.1 142 74.6
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 1.7e-51 206.5 146 71.2
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 2.2e-51 206.1 143 71.3
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 2.2e-51 206.1 139 74.8
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 2.9e-51 205.7 142 72.5
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 3.8e-51 205.3 151 69.5
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 3.8e-51 205.3 142 72.5
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 3.8e-51 205.3 139 74.1
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 1.1e-50 203.8 141 73.0
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 2.5e-50 202.6 140 73.6
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 4.2e-50 201.8 149 68.5
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 9.4e-50 200.7 140 69.3
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 1.2e-49 200.3 150 68.0
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 1.6e-49 199.9 142 71.1
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 2.1e-49 199.5 143 67.8
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 2.1e-49 199.5 145 68.3
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 3.6e-49 198.7 143 70.6
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 6.1e-49 198.0 142 69.7
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 1.0e-48 197.2 149 67.1
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 1.4e-48 196.8 144 68.8
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 1.4e-48 196.8 143 67.8
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 2.3e-48 196.1 147 68.0
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 2.3e-48 196.1 122 75.4
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 2.3e-48 196.1 144 68.1
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 3.0e-48 195.7 134 73.1
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 3.9e-48 195.3 142 68.3
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 5.2e-48 194.9 144 66.0
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 5.2e-48 194.9 143 69.2
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 6.7e-48 194.5 145 67.6
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 6.7e-48 194.5 144 67.4
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 8.8e-48 194.1 142 70.4
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 5.7e-47 191.4 108 82.4
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 7.4e-47 191.0 137 68.6
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 7.4e-47 191.0 134 69.4
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 7.4e-47 191.0 149 64.4
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 9.7e-47 190.7 164 62.8
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 1.3e-46 190.3 140 65.7
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 1.3e-46 190.3 142 67.6
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 1.7e-46 189.9 131 71.0
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 1.7e-46 189.9 144 64.6
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 2.8e-46 189.1 141 68.1
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 2.8e-46 189.1 143 65.7
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.8e-46 189.1 149 64.4
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 2.8e-46 189.1 135 69.6
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 4.8e-46 188.3 142 64.1
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 6.3e-46 188.0 129 68.2
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 8.2e-46 187.6 142 63.4
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 1.1e-45 187.2 142 63.4
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 1.8e-45 186.4 135 65.9
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 1.8e-45 186.4 152 62.5
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 2.4e-45 186.0 130 70.0
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 2.4e-45 186.0 142 62.7
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 3.1e-45 185.7 142 62.7
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 3.1e-45 185.7 142 62.7
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 3.1e-45 185.7 142 62.7
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 3.1e-45 185.7 139 66.2
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 4.1e-45 185.3 132 70.5
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 5.3e-45 184.9 142 62.0
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 7.0e-45 184.5 166 60.2
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 1.2e-44 183.7 136 64.0
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 1.2e-44 183.7 136 64.0
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.2e-44 183.7 149 63.8
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 1.6e-44 183.3 140 62.1
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.0e-44 183.0 148 62.2
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 2.6e-44 182.6 142 60.6
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 2.6e-44 182.6 141 61.7
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 2.6e-44 182.6 149 63.8
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 3.5e-44 182.2 136 63.2
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 3.5e-44 182.2 136 63.2
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 3.5e-44 182.2 139 64.0
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 4.5e-44 181.8 137 67.2
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 4.5e-44 181.8 136 66.2
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 4.5e-44 181.8 166 59.6
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 5.9e-44 181.4 139 64.0
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 5.9e-44 181.4 141 63.1
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 1.0e-43 180.6 143 62.2
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 1.3e-43 180.3 136 65.4
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 2.2e-43 179.5 129 65.1
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 2.9e-43 179.1 146 62.3
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 3.8e-43 178.7 136 61.8
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 3.8e-43 178.7 137 61.3
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 5.0e-43 178.3 136 64.7
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 5.0e-43 178.3 129 64.3
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 5.0e-43 178.3 129 64.3
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 8.5e-43 177.6 142 60.6
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 8.5e-43 177.6 143 62.9
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 1.1e-42 177.2 132 64.4
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.5e-42 176.8 111 73.9
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 1.5e-42 176.8 155 61.3
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 1.9e-42 176.4 142 59.9
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 2.5e-42 176.0 142 59.2
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 3.2e-42 175.6 111 74.8
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 3.2e-42 175.6 135 62.2
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 7.2e-42 174.5 136 60.3
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 1.2e-41 173.7 119 72.3
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 1.6e-41 173.3 104 76.9
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 9.7e-39 164.1 119 67.2
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 2.8e-38 162.5 106 72.6
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 4.8e-38 161.8 120 64.2
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 2.7e-33 146.0 139 60.4
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 1.8e-32 143.3 130 53.1
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 9.1e-29 131.0 151 50.3
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 1.9e-26 123.2 139 43.9
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 3.0e-24 115.9 116 44.0
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 6.8e-24 114.8 66 78.8
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 8.9e-24 114.4 114 47.4
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 4.4e-23 112.1 109 53.2
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 1.4e-16 90.5 73 61.6
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 1.5e-15 87.0 151 31.1
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 1.3e-14 84.0 56 71.4
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.4e-13 80.5 128 29.7
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 1.4e-08 63.9 133 30.1


User provided reference genes

Program Settings