Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034684 Camellia sinensis var. sinensis HOM05D004643 ORTHO05D005535 1.2e-55 219.5 106 100.0
Actinidia09108 Actinidia chinensis HOM05D004643 ORTHO05D005535 1.3e-33 146.4 100 77.0
Dinv22507 Davidia involucrata HOM05D004643 ORTHO05D005535 2.9e-33 145.2 100 74.0
Actinidia19959 Actinidia chinensis HOM05D004643 ORTHO05D005535 3.7e-33 144.8 100 76.0
CSS0031620 Camellia sinensis var. sinensis HOM05D004643 ORTHO05D005535 4.1e-32 141.4 99 70.7
vmacro02609 Vaccinium macrocarpon HOM05D004643 ORTHO05D005535 1.2e-28 129.8 101 66.3
Rhsim13G0028400 Rhododendron simsii HOM05D004643 ORTHO05D005535 1.8e-27 125.9 124 57.3
Lj2C1166G12 Lonicera japonica HOM05D004643 ORTHO05D005535 5.8e-26 120.9 137 51.8
Oeu047218.1 Olea europaea HOM05D004643 ORTHO05D005535 3.7e-25 118.2 95 61.1
Potri.002G048500 Populus trichocarpa HOM05D004643 ORTHO05D005535 2.3e-22 109.0 97 62.9
Hma1.2p1_0172F.1_g075970 Hydrangea macrophylla HOM05D004643 ORTHO05D005535 3.0e-22 108.6 101 56.4
Cc01_g19060 Coffea canephora HOM05D004643 ORTHO05D005535 3.9e-22 108.2 101 57.4
GSVIVG01003113001 Vitis vinifera HOM05D004643 ORTHO05D005535 3.9e-22 108.2 100 58.0
Migut.O00727 Erythranthe guttata HOM05D004643 ORTHO05D005535 7.3e-21 104.0 100 52.0
Aqoxy5G00405 Aquilegia oxysepala HOM05D004643 ORTHO05D005535 1.1e-19 100.1 101 54.5
Sabra02G0039600 Salix brachista HOM05D004643 ORTHO05D005535 1.4e-19 99.8 98 58.2
Migut.N02031 Erythranthe guttata HOM05D004643 ORTHO05D005535 1.8e-19 99.4 100 50.0
Ciclev10021137m.g Citrus clementina HOM05D004643 ORTHO05D005535 1.5e-18 96.3 99 53.5
Gorai.004G077100 Gossypium raimondii HOM05D004643 ORTHO05D005535 3.4e-18 95.1 99 53.5
Nitab4.5_0001044g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 3.4e-18 95.1 102 51.0
TAR362G0460 Trochodendron aralioides HOM05D004643 ORTHO05D005535 3.4e-18 95.1 101 52.5
HanXRQChr01g0005571 Helianthus annuus HOM05D004643 ORTHO05D005535 4.4e-18 94.7 95 58.9
Potri.005G214300 Populus trichocarpa HOM05D004643 ORTHO05D005535 7.5e-18 94.0 97 55.7
TAR365G0093 Trochodendron aralioides HOM05D001497 ORTHO05D001707 7.5e-18 94.0 100 50.0
Thecc.01G272300 Theobroma cacao HOM05D004643 ORTHO05D005535 9.8e-18 93.6 99 54.5
Sabra05G0163800 Salix brachista HOM05D004643 ORTHO05D005535 1.3e-17 93.2 97 54.6
Gohir.D08G072800 Gossypium hirsutum HOM05D004643 ORTHO05D005535 8.3e-17 90.5 98 52.0
Atru.chr5.1514 Acer truncatum HOM05D004643 ORTHO05D005535 1.1e-16 90.1 99 48.5
Duzib211G0433 Durio zibethinus HOM05D004643 ORTHO05D005535 3.2e-16 88.6 98 55.1
ECA248G3352 Erigeron canadensis HOM05D004643 ORTHO05D005535 3.2e-16 88.6 91 57.1
CAN.G771.7 Capsicum annuum HOM05D004643 ORTHO05D005535 4.1e-16 88.2 101 46.5
Duzib138G1309 Durio zibethinus HOM05D004643 ORTHO05D005535 5.4e-16 87.8 97 51.5
MSTRG.21530 Avicennia marina HOM05D004643 ORTHO05D005535 7.1e-16 87.4 100 49.0
DCAR_002706 Daucus carota HOM05D004643 ORTHO05D005535 1.2e-15 86.7 103 52.4
Gohir.A12G002900 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.2e-15 86.7 98 53.1
CAN.G380.10 Capsicum annuum HOM05D004643 ORTHO05D005535 1.6e-15 86.3 76 60.5
Gorai.008G002400 Gossypium raimondii HOM05D004643 ORTHO05D005535 2.1e-15 85.9 98 53.1
TAR636G3033 Trochodendron aralioides HOM05D004643 ORTHO05D005535 1.3e-14 83.2 92 51.1
Gohir.D12G002600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 3.0e-14 82.0 98 51.0
COL.COLO4_09196 Corchorus olitorius HOM05D004643 ORTHO05D005535 1.1e-13 80.1 78 59.0
PGSC0003DMG401020059 Solanum tuberosum HOM05D004643 ORTHO05D005535 1.1e-13 80.1 102 46.1
Nitab4.5_0015056g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 3.3e-13 78.6 79 54.4
Solyc09g065630.3 Solanum lycopersicum HOM05D004643 ORTHO05D005535 4.3e-13 78.2 99 47.5
Lsat_1_v5_gn_5_185821 Lactuca sativa HOM05D004643 ORTHO05D005535 5.6e-13 77.8 92 52.2
Sopen09g027380 Solanum pennellii HOM05D004643 ORTHO05D005535 9.5e-13 77.0 99 47.5
PGSC0003DMG400019346 Solanum tuberosum HOM05D004643 ORTHO05D005535 9.5e-13 77.0 99 46.5
HanXRQChr11g0338851 Helianthus annuus HOM05D004643 ORTHO05D005535 1.6e-12 76.3 93 51.6
Nn6g34159 Nelumbo nucifera HOM05D004643 ORTHO05D005535 3.6e-12 75.1 93 50.5
MBI11_g22675_MAGBIO Magnolia biondii HOM05D004643 ORTHO05D005535 6.2e-12 74.3 79 50.6
Solyc06g084120.4 Solanum lycopersicum HOM05D004643 ORTHO05D005535 1.8e-11 72.8 102 44.1
unitig_0.g136 Utricularia gibba HOM05D004643 ORTHO05D005535 8.9e-11 70.5 96 42.7
SGA_v2.0_scaffold138G35301 Striga asiatica HOM05D004643 ORTHO05D005535 3.4e-10 68.6 67 53.7
Peaxi162Scf00230g00029 Petunia axillaris HOM05D004643 ORTHO05D005535 1.7e-09 66.2 81 45.7
Nitab4.5_0000252g0230 Nicotiana tabacum HOM05D004643 ORTHO05D005535 2.9e-09 65.5 101 39.6
Lj5g0008364 Lotus japonicus HOM05D004643 ORTHO05D005535 3.2e-08 62.0 96 45.8
Nitab4.5_0000871g0020 Nicotiana tabacum HOM05D004643 ORTHO05D005535 4.1e-08 61.6 101 39.6
QL06p001136 Quercus lobata HOM05D004643 ORTHO05D005535 7.1e-08 60.8 100 42.0
unitig_60.g25785 Utricularia gibba HOM05D004643 ORTHO05D005535 2.1e-07 59.3 76 47.4
Lsat_1_v5_gn_8_94021 Lactuca sativa HOM05D004643 ORTHO05D005535 2.7e-07 58.9 88 43.2
Medtr1g102900 Medicago truncatula HOM05D004643 ORTHO05D005535 3.5e-07 58.5 94 46.8
CiPaw.02G121300 Carya illinoinensis HOM05D004643 ORTHO05D005535 6.0e-07 57.8 91 40.7
Glyma.20G150000 Glycine max HOM05D004643 ORTHO05D005535 6.0e-07 57.8 96 43.8
Ca_10855_v3 Cicer arietinum L. HOM05D004643 ORTHO05D005535 1.0e-06 57.0 94 45.7
HPP92_023542 Vanilla planifolia HOM05D004643 ORTHO05D005535 1.0e-06 57.0 71 45.1
COL.COLO4_21561 Corchorus olitorius HOM05D004643 ORTHO05D005535 1.7e-06 56.2 96 42.7
Duzib151G1159 Durio zibethinus HOM05D004643 ORTHO05D005535 1.7e-06 56.2 94 43.6
GSVIVG01018038001 Vitis vinifera HOM05D004643 ORTHO05D005535 3.9e-06 55.1 78 43.6
MD16G1199200 Malus domestica HOM05D004643 ORTHO05D005535 5.1e-06 54.7 66 43.9
TWI53G0950 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 5.1e-06 54.7 68 44.1
Haze_11230 Corylus avellana HOM05D004643 ORTHO05D005535 6.6e-06 54.3 85 41.2
RcHm_v2.0_Chr4g0387691 Rosa chinensis HOM05D004643 ORTHO05D005535 6.6e-06 54.3 62 46.8
Phvul.007G061400 Phaseolus vulgaris HOM05D004643 ORTHO05D005535 8.6e-06 53.9 96 38.5


User provided reference genes

Program Settings