Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034676 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.7e-62 241.5 134 100.0
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 4.0e-32 141.7 122 67.2
CSS0049190 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 8.3e-22 107.5 122 56.6
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 1.1e-13 80.5 91 54.9
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 2.7e-12 75.9 91 50.5
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 2.7e-12 75.9 91 48.4
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.0e-11 73.9 91 50.5
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 2.3e-11 72.8 91 48.4
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 3.0e-11 72.4 116 43.1
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.0e-11 72.4 116 43.1
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.9e-11 72.0 116 42.2
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 8.6e-11 70.9 91 49.5
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.9e-10 69.7 93 46.2
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 2.5e-10 69.3 91 49.5
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 3.3e-10 68.9 91 45.1
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 4.3e-10 68.6 91 46.2
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 5.6e-10 68.2 87 49.4
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 9.6e-10 67.4 91 47.3
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 2.1e-09 66.2 89 44.9
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 3.6e-09 65.5 91 45.1
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 3.6e-09 65.5 91 44.0
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 4.7e-09 65.1 92 44.6
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 1.8e-08 63.2 91 45.1
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 1.8e-08 63.2 91 44.0
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 2.4e-08 62.8 89 43.8
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.1e-08 62.4 92 43.5
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 3.1e-08 62.4 92 43.5
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 3.1e-08 62.4 89 40.4
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 4.0e-08 62.0 115 40.0
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 4.0e-08 62.0 91 45.1
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 6.8e-08 61.2 91 44.0
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 6.8e-08 61.2 89 39.3
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 6.8e-08 61.2 89 42.7
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.2e-07 60.5 89 39.3
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.5e-07 60.1 90 38.9
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 1.5e-07 60.1 101 40.6
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.5e-07 60.1 89 42.7
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 2.0e-07 59.7 98 44.9
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.0e-07 59.7 88 46.6
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.0e-07 59.7 88 46.6
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.6e-07 59.3 95 42.1
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 3.4e-07 58.9 89 41.6
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 4.4e-07 58.5 89 43.8
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 9.9e-07 57.4 118 37.3
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 2.9e-06 55.8 91 41.8
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 2.9e-06 55.8 91 36.3
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 6.4e-06 54.7 89 39.3
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 6.4e-06 54.7 91 41.8
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 6.4e-06 54.7 89 38.2
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 6.4e-06 54.7 114 38.6


User provided reference genes

Program Settings