Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.0e-193 679.9 333 100.0
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.7e-92 343.6 319 60.2
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 6.9e-25 119.0 134 49.3
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.6e-24 117.1 153 44.4
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.0e-20 105.1 149 41.6
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.9e-20 103.2 122 45.1
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-19 101.3 274 28.8
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 5.6e-19 99.4 183 35.0
CSS0018973 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 2.2e-15 87.4 66 59.1
CSS0022885 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 2.2e-15 87.4 66 59.1
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 3.2e-14 83.6 108 38.9
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-14 83.2 183 32.2
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 7.1e-14 82.4 146 32.9
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 1.2e-13 81.6 147 35.4
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.7e-12 75.9 118 31.4
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 1.5e-11 74.7 150 28.7
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.5e-11 73.9 137 32.8
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.7e-11 72.8 112 31.2
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-10 70.9 111 29.7
CSS0020711 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D006370 2.8e-10 70.5 62 51.6
Nitab4.5_0000378g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.7e-10 70.1 273 26.4
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 3.7e-10 70.1 149 32.9
CSS0007903 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 4.8e-10 69.7 61 54.1
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 8.2e-10 68.9 281 27.0
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-09 68.6 111 30.6
CSS0048052 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 1.8e-09 67.8 134 29.9
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 6.9e-09 65.9 138 30.4
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.9e-09 65.9 102 30.4
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 9.0e-09 65.5 106 34.9
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 9.0e-09 65.5 133 32.3
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.0e-08 64.3 103 31.1
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 2.6e-08 63.9 137 30.7
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.5e-08 63.2 122 30.3
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 1.3e-07 61.6 134 32.1
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.7e-07 61.2 168 26.2
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 1.7e-07 61.2 131 29.0
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 1.7e-07 61.2 161 26.7
Nitab4.5_0000492g0040 Nicotiana tabacum HOM05D000104 ORTHO05D005604 1.7e-07 61.2 168 26.2
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.7e-07 61.2 107 30.8
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 2.2e-07 60.8 107 28.0
Nitab4.5_0002094g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-07 60.8 128 29.7
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-07 60.5 156 26.3
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.9e-07 60.5 120 31.7
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 3.8e-07 60.1 110 30.9
Nitab4.5_0000259g0310 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.8e-07 60.1 165 27.3
Nitab4.5_0028560g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.0e-07 59.7 167 26.9
Nitab4.5_0000171g0390 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.5e-07 59.3 158 27.8
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 6.5e-07 59.3 166 28.9
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 1.1e-06 58.5 119 28.6
Nitab4.5_0000687g0070 Nicotiana tabacum HOM05D006502 ORTHO05D004350 1.9e-06 57.8 291 23.0
Nitab4.5_0000483g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-06 57.4 128 30.5
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.2e-06 57.0 111 27.9
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 4.2e-06 56.6 98 33.7
Nitab4.5_0001360g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.2e-06 56.6 158 25.3
Nitab4.5_0000108g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.5e-06 56.2 124 28.2
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 5.5e-06 56.2 169 27.2
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 5.5e-06 56.2 97 34.0
Nitab4.5_0003553g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.2e-06 55.8 131 26.7
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 9.3e-06 55.5 156 28.2


User provided reference genes

Program Settings