Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034647 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-46 189.5 85 100.0
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-24 115.2 84 58.3
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.3e-24 114.4 84 58.3
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-23 112.8 84 59.5
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-23 112.8 84 60.7
Rhsim01G0139300 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-23 112.5 84 57.1
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-23 111.7 84 57.1
CSS0017812 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.2e-23 110.2 84 60.7
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.1e-22 108.2 80 58.8
Rhsim12G0079800 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.0e-22 107.8 84 56.0
CSS0011674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.3e-22 107.5 85 61.2
CSS0002781 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.6e-21 103.6 84 58.3
CSS0025077 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.6e-21 103.6 84 56.0
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.3e-20 102.8 84 53.6
RhsimUnG0224600 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.0e-18 94.0 81 54.3
Rhsim02G0217100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.8e-17 92.4 76 52.6
Rhsim09G0070000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.8e-17 92.4 83 47.0
Rhsim03G0083500 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.0e-17 91.7 82 46.3
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.7e-17 90.1 82 45.1
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-16 89.4 82 45.1
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 1.5e-16 89.4 76 51.3
Rhsim10G0112100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-16 89.0 76 53.9
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.9e-16 89.0 84 47.6
Rhsim01G0110800 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-16 88.6 76 48.7
Rhsim02G0107700 Rhododendron simsii HOM05D000048 ORTHO05D000006 2.5e-16 88.6 79 49.4
Rhsim03G0080700 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-16 88.6 82 45.1
Rhsim03G0167500 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-16 88.2 76 52.6
Rhsim01G0274800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.3e-15 86.3 76 50.0
Rhsim02G0238600 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.3e-15 86.3 82 46.3
Rhsim07G0114000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-15 85.9 76 47.4
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 2.2e-15 85.5 76 50.0
Rhsim02G0152800 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.8e-15 85.1 82 45.1
Rhsim03G0009500 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.8e-15 84.3 81 45.7
Rhsim02G0229500 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.3e-15 84.0 76 43.4
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.2e-15 83.6 81 48.1
Rhsim09G0064700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.1e-14 81.6 76 43.4
Rhsim09G0065000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.1e-14 81.6 76 43.4
Rhsim02G0177800 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.3e-14 80.9 76 46.1
Rhsim05G0162800 Rhododendron simsii HOM05D001637 ORTHO05D000006 5.3e-14 80.9 76 46.1
Rhsim01G0048000 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.9e-14 80.5 76 47.4
Rhsim01G0092300 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.0e-14 80.1 76 46.1
Rhsim01G0140300 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-13 79.3 76 47.4
Rhsim08G0131400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-13 79.3 58 51.7
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.6e-13 78.6 76 44.7
Rhsim12G0088700 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.5e-13 77.8 76 44.7
Rhsim01G0175200 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.7e-12 75.9 76 44.7
Rhsim11G0021500 Rhododendron simsii HOM05D002187 ORTHO05D002243 1.4e-11 72.8 76 42.1
Rhsim03G0108700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-11 72.4 76 44.7
vmacro07385 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 3.2e-11 71.6 67 43.3
RhsimUnG0155100 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.2e-11 70.5 74 36.5
Rhsim02G0151600 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.2e-10 69.7 76 43.4
Rhsim09G0083100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-10 69.3 76 43.4
vmacro05354 Vaccinium macrocarpon HOM05D002580 ORTHO05D002811 2.7e-10 68.6 75 40.0
Manes.07G125402 Manihot esculenta HOM05D000003 ORTHO05D000006 6.1e-10 67.4 82 39.0
Rhsim11G0006400 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.1e-10 67.4 76 43.4
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-09 66.2 78 41.0
COL.COLO4_08414 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.9e-09 64.7 61 47.5
TAR055G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000006 5.1e-09 64.3 81 38.3
PSO040G0023 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-08 63.2 82 31.7
PSO675G7157 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-08 62.8 66 42.4
Rhsim11G0048600 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.5e-08 62.8 58 44.8
CANSAT35G2060 Cannabis sativa HOM05D000003 ORTHO05D000006 1.9e-08 62.4 83 28.9
Rhsim08G0119400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-08 62.4 56 41.1
Rhsim05G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-08 62.0 59 39.0
Rhsim05G0135000 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-08 62.0 55 38.2
Dinv34373 Davidia involucrata HOM05D000003 ORTHO05D000006 3.3e-08 61.6 73 39.7
PSO675G1004 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-08 61.6 80 35.0
Rhsim08G0187900 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.3e-08 61.6 76 38.2
PSO111G0003 Papaver somniferum HOM05D000003 ORTHO05D000006 4.3e-08 61.2 72 34.7
Rhsim09G0090900 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.3e-08 61.2 46 56.5
TAR391G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 4.3e-08 61.2 83 32.5
BcaB08g34387 Brassica carinata HOM05D000003 ORTHO05D000006 5.7e-08 60.8 85 40.0
BcaC03g15337 Brassica carinata HOM05D000003 ORTHO05D000006 5.7e-08 60.8 84 38.1
C06p01420 Brassica napus HOM05D000003 ORTHO05D000006 5.7e-08 60.8 85 37.6
FvH4_6g23032 Fragaria vesca HOM05D000003 ORTHO05D017879 5.7e-08 60.8 83 34.9
BcaC02g07975 Brassica carinata HOM05D010764 ORTHO05D016724 9.7e-08 60.1 82 32.9
BolC7t42143H Brassica oleracea HOM05D000003 ORTHO05D027524 9.7e-08 60.1 84 36.9
Rhsim05G0192100 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.7e-08 60.1 55 41.8
Actinidia31222 Actinidia chinensis HOM05D000003 ORTHO05D000006 2.2e-07 58.9 49 55.1
Aqoxy1G03976 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.2e-07 58.9 75 36.0
CANSAT01G2128 Cannabis sativa HOM05D000003 ORTHO05D000006 2.8e-07 58.5 84 29.8
Aqoxy1G02664 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.7e-07 58.2 81 33.3
PSO339G1304 Papaver somniferum HOM05D000003 ORTHO05D000006 3.7e-07 58.2 67 35.8
PSO782G0225 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-07 58.2 72 37.5
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.7e-07 58.2 82 34.1
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 4.8e-07 57.8 79 32.9
PSO017G2214 Papaver somniferum HOM05D000003 ORTHO05D000004 4.8e-07 57.8 81 28.4
Gohir.D03G064666 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.3e-07 57.4 74 37.8
Gohir.D03G067883 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.3e-07 57.4 74 37.8
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 8.2e-07 57.0 84 31.0
Aa31sc1394G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 82 31.7
PSO210G0481 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-06 56.6 83 30.1
BcaC05g29079 Brassica carinata HOM05D010764 ORTHO05D016724 1.4e-06 56.2 62 38.7
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 56.2 83 32.5
CiPaw.16G004600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-06 56.2 81 34.6
FvH4_6g23371 Fragaria vesca HOM05D000003 ORTHO05D000006 1.4e-06 56.2 76 31.6
BcaC08g47582 Brassica carinata HOM05D010764 ORTHO05D016724 1.8e-06 55.8 69 36.2
CANSAT11G0839 Cannabis sativa HOM05D000003 ORTHO05D000006 1.8e-06 55.8 69 31.9
PSO017G2373 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-06 55.8 81 32.1
PSO339G1594 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-06 55.8 83 33.7
PSO782G4220 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 55.8 72 31.9
RhsimUnG0081000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.8e-06 55.8 53 35.8
BcaB03g15672 Brassica carinata HOM05D000003 ORTHO05D000006 2.4e-06 55.5 85 38.8
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-06 55.5 84 31.0
CANSAT21G2014 Cannabis sativa HOM05D000003 ORTHO05D000006 2.4e-06 55.5 83 32.5
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 55.5 80 36.2
AUR62035910 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.4e-06 55.5 76 36.8
Hma1.2p1_0266F.1_g106910 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 2.4e-06 55.5 82 32.9
Nn8g41018 Nelumbo nucifera HOM05D000003 ORTHO05D000006 2.4e-06 55.5 76 34.2
BcaB07g30348 Brassica carinata HOM05D010764 ORTHO05D016724 3.1e-06 55.1 66 34.8
CANSAT64G1387 Cannabis sativa HOM05D000003 ORTHO05D000006 3.1e-06 55.1 83 36.1
PSO339G0099 Papaver somniferum HOM05D000003 ORTHO05D000006 3.1e-06 55.1 82 26.8
CANSAT21G0357 Cannabis sativa HOM05D000003 ORTHO05D000006 4.1e-06 54.7 76 38.2
CiPaw.02G061300 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.1e-06 54.7 73 34.2
PSO017G2287 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-06 54.7 65 33.8
PSO675G6789 Papaver somniferum HOM05D000003 ORTHO05D000006 4.1e-06 54.7 82 25.6
Aqoxy1G03380 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.3e-06 54.3 82 28.0
BolC7t43000H Brassica oleracea HOM05D000003 ORTHO05D018675 5.3e-06 54.3 83 32.5
CANSAT21G0975 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 54.3 83 32.5
PSO063G4704 Papaver somniferum HOM05D000003 ORTHO05D000006 5.3e-06 54.3 73 35.6
PSO478G1538 Papaver somniferum HOM05D000003 ORTHO05D000006 5.3e-06 54.3 82 26.8
BolC4t23478H Brassica oleracea HOM05D000003 ORTHO05D000006 6.9e-06 53.9 83 31.3
PSO447G0142 Papaver somniferum HOM05D000003 ORTHO05D000004 9.1e-06 53.5 55 40.0
Rhsim02G0125500 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.1e-06 53.5 45 48.9
Rhsim02G0183800 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.1e-06 53.5 81 34.6
Rhsim03G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.1e-06 53.5 75 34.7


User provided reference genes

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