Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 8.9e-40 166.4 79 100.0
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.5e-15 85.9 49 83.7
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 4.2e-13 77.8 67 61.2
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 9.3e-13 76.6 48 75.0
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 1.6e-12 75.9 48 72.9
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.5e-12 74.7 52 65.4
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 3.5e-12 74.7 52 65.4
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 4.6e-12 74.3 48 70.8
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 4.6e-12 74.3 57 61.4
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 4.6e-12 74.3 51 68.6
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 4.6e-12 74.3 45 77.8
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 6.0e-12 73.9 47 66.0
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 7.9e-12 73.6 57 61.4
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.0e-11 73.2 54 68.5
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 1.3e-11 72.8 48 70.8
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 2.3e-11 72.0 48 64.6
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 3.0e-11 71.6 52 59.6
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 5.1e-11 70.9 45 68.9
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 5.1e-11 70.9 46 67.4
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 6.7e-11 70.5 49 73.5
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 6.7e-11 70.5 49 65.3
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 8.7e-11 70.1 48 68.8
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 1.1e-10 69.7 48 64.6
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 1.9e-10 68.9 45 66.7
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 4.3e-10 67.8 45 71.1
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 4.3e-10 67.8 48 60.4
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 4.3e-10 67.8 53 64.2
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 5.6e-10 67.4 49 65.3
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 5.6e-10 67.4 45 66.7
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 7.4e-10 67.0 46 60.9
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 7.4e-10 67.0 46 60.9
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 7.4e-10 67.0 48 64.6
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 9.6e-10 66.6 46 63.0
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 9.6e-10 66.6 47 61.7
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 1.3e-09 66.2 47 61.7
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.3e-09 66.2 54 53.7
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.3e-09 66.2 45 66.7
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 2.1e-09 65.5 45 68.9
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.1e-09 65.5 52 59.6
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 2.1e-09 65.5 41 70.7
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 2.8e-09 65.1 43 69.8
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.7e-09 64.7 49 59.2
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.7e-09 64.7 46 60.9
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.7e-09 64.7 46 60.9
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 6.2e-09 63.9 48 54.2
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.1e-08 63.2 50 60.0
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 1.1e-08 63.2 43 65.1
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 1.4e-08 62.8 59 52.5
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 1.8e-08 62.4 57 52.6
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.8e-08 62.4 48 56.2
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 2.4e-08 62.0 40 72.5
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 4.0e-08 61.2 45 57.8
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 5.3e-08 60.8 40 62.5
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 5.3e-08 60.8 45 60.0
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 6.9e-08 60.5 52 50.0
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 9.0e-08 60.1 40 67.5
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 9.0e-08 60.1 43 62.8
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 1.2e-07 59.7 49 63.3
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.2e-07 59.7 43 62.8
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 1.2e-07 59.7 59 49.2
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 1.5e-07 59.3 57 50.9
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 1.5e-07 59.3 45 57.8
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.5e-07 59.3 43 62.8
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 7.6e-07 57.0 57 50.9
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 7.6e-07 57.0 48 56.2
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 2.2e-06 55.5 44 52.3
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 2.2e-06 55.5 45 60.0
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 2.9e-06 55.1 62 48.4
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 2.9e-06 55.1 56 44.6
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.9e-06 55.1 44 52.3
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 4.9e-06 54.3 43 60.5
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 4.9e-06 54.3 46 58.7
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 6.4e-06 53.9 62 45.2
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 6.4e-06 53.9 52 46.2


User provided reference genes

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