Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 2.3e-66 255.8 160 100.0
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 3.6e-32 142.1 166 54.8
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 6.2e-32 141.4 164 53.7
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 1.4e-31 140.2 158 53.2
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 1.4e-31 140.2 165 51.5
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.8e-31 139.8 162 53.1
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 2.4e-31 139.4 183 51.4
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 2.4e-31 139.4 165 58.2
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 6.9e-31 137.9 169 50.3
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.5e-30 136.7 169 52.1
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 2.6e-30 136.0 172 48.8
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 1.3e-29 133.7 177 49.2
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 2.9e-29 132.5 186 48.9
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 3.8e-29 132.1 156 51.3
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 8.4e-29 131.0 154 53.9
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.1e-28 130.6 170 63.5
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 5.4e-28 128.3 168 51.8
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 9.3e-28 127.5 171 49.7
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 9.3e-28 127.5 161 50.3
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 4.6e-27 125.2 157 55.4
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 6.0e-27 124.8 164 48.8
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 3.0e-26 122.5 157 47.1
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 3.0e-26 122.5 159 55.3
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 5.1e-26 121.7 165 47.3
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 6.7e-26 121.3 165 51.5
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 6.7e-26 121.3 165 51.5
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.5e-25 120.2 172 50.0
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 1.5e-25 120.2 158 50.0
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 2.5e-25 119.4 158 50.0
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.3e-25 119.0 157 49.7
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.3e-25 119.0 157 49.7
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 4.3e-25 118.6 174 47.1
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.3e-25 118.6 157 49.0
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 5.6e-25 118.2 163 50.9
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 7.4e-25 117.9 158 47.5
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 7.4e-25 117.9 166 47.6
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 9.6e-25 117.5 166 47.6
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.6e-24 116.7 173 46.2
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.7e-24 115.5 158 48.1
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 8.1e-24 114.4 175 46.9
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 8.1e-24 114.4 170 50.0
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 3.1e-23 112.5 163 42.3
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 4.0e-23 112.1 175 45.7
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.2e-22 110.5 176 43.8
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 1.5e-22 110.2 165 44.8
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.0e-22 109.8 158 46.8
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.0e-22 109.8 189 40.2
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 2.6e-22 109.4 157 43.9
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 9.9e-22 107.5 168 48.8
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.7e-21 106.7 141 48.9
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 1.7e-21 106.7 155 46.5
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 2.2e-21 106.3 166 42.2
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 2.2e-21 106.3 164 57.3
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 2.2e-21 106.3 166 42.8
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 2.2e-21 106.3 163 43.6
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 4.9e-21 105.1 153 41.2
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 8.4e-21 104.4 163 47.9
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 1.1e-20 104.0 171 45.0
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 1.1e-20 104.0 153 41.8
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.9e-20 103.2 156 41.0
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 3.2e-20 102.4 170 44.1
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 3.2e-20 102.4 153 41.8
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 3.2e-20 102.4 159 41.5
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 7.1e-20 101.3 131 53.4
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 9.3e-20 100.9 159 44.0
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 1.2e-19 100.5 157 42.7
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.6e-19 100.1 159 41.5
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 2.1e-19 99.8 156 40.4
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 2.7e-19 99.4 157 40.1
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 2.7e-19 99.4 157 40.1
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 3.5e-19 99.0 182 39.6
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 4.6e-19 98.6 156 39.7
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.3e-18 97.1 180 47.2
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.8e-18 96.7 181 47.0
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 5.1e-18 95.1 180 46.7
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 1.1e-17 94.0 72 75.0
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 8.2e-16 87.8 163 36.2
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 1.4e-15 87.0 177 49.7
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 1.8e-15 86.7 160 38.1
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 4.0e-15 85.5 160 39.4
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 1.2e-14 84.0 156 41.0
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 2.0e-14 83.2 145 41.4
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 5.8e-14 81.6 167 40.7
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.7e-13 80.1 152 36.2
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 2.9e-13 79.3 155 34.8
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 6.5e-13 78.2 157 49.0
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 6.5e-13 78.2 152 34.9
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 1.9e-12 76.6 156 37.8
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 2.5e-12 76.3 172 47.7
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 1.2e-11 73.9 77 54.5
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 1.6e-11 73.6 157 42.7
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 1.3e-10 70.5 75 49.3


User provided reference genes

Program Settings