Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 1.4e-103 379.8 217 100.0
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 1.4e-79 300.1 193 80.8
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 9.2e-79 297.4 216 75.0
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 9.2e-79 297.4 216 75.0
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 9.2e-79 297.4 216 75.0
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 2.0e-78 296.2 193 79.8
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 7.8e-78 294.3 216 71.8
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 3.9e-77 292.0 193 79.3
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 8.6e-77 290.8 193 76.7
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 9.5e-76 287.3 199 77.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 9.5e-76 287.3 193 77.2
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.6e-75 286.6 193 77.2
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.6e-75 286.6 193 77.2
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.8e-75 285.8 193 76.2
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.8e-75 285.8 193 76.2
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 2.8e-75 285.8 193 75.1
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 2.8e-75 285.8 191 79.1
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.6e-75 285.4 193 77.2
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 4.7e-75 285.0 194 77.8
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 4.7e-75 285.0 190 77.4
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 6.2e-75 284.6 193 76.7
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 8.1e-75 284.3 193 76.7
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 1.8e-74 283.1 193 82.4
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.1e-74 282.3 192 77.6
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 3.1e-74 282.3 190 77.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 5.2e-74 281.6 193 75.1
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 1.2e-73 280.4 193 75.6
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.2e-73 280.4 194 75.3
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.5e-73 280.0 200 76.0
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.5e-73 280.0 193 75.1
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 2.0e-73 279.6 219 70.3
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 2.6e-73 279.3 193 75.6
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.3e-72 276.9 193 75.1
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.7e-72 276.6 189 76.7
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 2.2e-72 276.2 191 74.3
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 2.9e-72 275.8 197 74.6
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 2.9e-72 275.8 191 74.9
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.9e-72 275.0 196 74.5
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.9e-72 275.0 196 74.5
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 4.9e-72 275.0 196 74.5
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 8.3e-72 274.2 191 73.3
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 1.1e-71 273.9 191 74.9
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.1e-71 273.9 190 74.7
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.4e-71 273.5 191 75.4
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 3.2e-71 272.3 216 68.5
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 4.1e-71 271.9 217 67.7
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 5.4e-71 271.6 219 70.3
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 7.1e-71 271.2 187 75.9
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 7.1e-71 271.2 191 72.8
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 9.2e-71 270.8 219 68.5
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.2e-70 270.4 193 74.6
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.2e-70 270.4 193 74.1
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.2e-70 270.4 218 69.7
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.6e-70 270.0 189 75.1
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 2.7e-70 269.2 216 69.0
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 4.6e-70 268.5 192 73.4
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 6.0e-70 268.1 193 72.5
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 7.8e-70 267.7 191 72.8
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 1.0e-69 267.3 190 73.7
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.3e-69 266.9 216 66.7
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.3e-69 266.9 191 73.3
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 1.7e-69 266.5 216 69.0
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.3e-69 266.2 190 72.1
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.3e-69 266.2 190 72.1
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 2.3e-69 266.2 190 73.7
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 2.3e-69 266.2 216 68.5
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 3.0e-69 265.8 190 72.1
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.5e-68 263.5 182 75.8
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 5.6e-68 261.5 216 65.7
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 5.6e-68 261.5 191 69.6
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 5.6e-68 261.5 191 69.6
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 9.5e-68 260.8 190 72.1
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 9.5e-68 260.8 190 72.1
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 9.5e-68 260.8 190 72.1
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.2e-67 260.4 190 74.2
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.2e-67 260.4 190 74.2
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.2e-67 260.4 195 69.7
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 2.1e-67 259.6 195 71.3
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 2.1e-67 259.6 194 75.8
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.8e-67 259.2 196 72.4
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 3.6e-67 258.8 192 68.8
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 4.7e-67 258.5 191 72.8
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 8.1e-67 257.7 190 70.5
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 8.1e-67 257.7 190 70.5
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-66 257.3 190 73.2
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 2.3e-66 256.1 191 70.7
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 3.1e-66 255.8 195 69.2
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.3e-64 250.4 190 70.5
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 9.2e-63 244.2 188 68.6
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 7.8e-62 241.1 195 65.6
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.8e-62 241.1 193 67.4
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.0e-61 240.7 190 66.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 3.9e-61 238.8 160 85.0
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 1.9e-60 236.5 189 67.2
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 8.1e-59 231.1 219 63.5
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.9e-56 222.6 162 69.8
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 7.1e-55 218.0 160 70.0
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.5e-52 209.5 170 66.5
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 5.8e-49 198.4 190 59.5
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 3.5e-46 189.1 190 51.6
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 6.0e-46 188.3 153 65.4
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.3e-45 187.2 215 50.2
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.8e-42 176.8 188 47.3
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.3e-40 170.6 193 52.3
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 8.4e-40 167.9 188 48.9
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.2e-38 164.1 121 71.9
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.0e-37 161.0 121 70.2
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.6e-33 146.4 112 68.8
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.8e-32 142.5 191 47.6
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 4.6e-30 135.6 128 52.3
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.4e-23 114.0 131 55.7
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 5.9e-17 92.0 94 55.3
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.8e-13 78.2 44 84.1
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.4e-10 70.9 46 73.9
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 1.2e-09 67.8 39 87.2
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.7e-06 55.8 33 75.8


User provided reference genes

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