Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034602 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 1.3e-243 845.9 421 100.0
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 8.9e-187 657.1 448 74.3
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 6.0e-175 617.8 421 73.6
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 4.3e-173 611.7 414 76.3
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 2.3e-171 605.9 421 71.7
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 8.9e-171 604.0 421 74.3
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.0e-170 602.8 416 71.9
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 7.5e-170 600.9 416 71.9
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 3.7e-169 598.6 421 73.6
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 8.3e-169 597.4 413 71.7
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 8.3e-169 597.4 420 71.2
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 1.4e-168 596.7 417 71.2
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 4.1e-168 595.1 416 71.4
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 4.6e-167 591.7 413 72.4
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 4.6e-167 591.7 415 70.8
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 7.8e-167 590.9 419 70.4
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 8.6e-166 587.4 415 71.8
TAR374G1461 Trochodendron aralioides HOM05D005523 ORTHO05D007089 5.6e-165 584.7 451 67.0
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 9.5e-165 583.9 411 71.0
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 8.1e-164 580.9 415 69.4
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 3.1e-163 578.9 422 69.0
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 6.8e-163 577.8 419 68.7
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 8.9e-163 577.4 451 65.2
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 8.9e-163 577.4 416 72.4
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 2.2e-161 572.8 415 69.9
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 1.4e-160 570.1 419 69.7
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 7.1e-160 567.8 418 69.1
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 7.1e-160 567.8 421 69.4
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 9.2e-160 567.4 421 68.2
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 2.1e-159 566.2 420 68.8
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 4.6e-159 565.1 419 68.3
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 4.6e-159 565.1 419 69.5
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 6.0e-159 564.7 419 68.7
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 1.0e-158 563.9 418 68.9
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 1.0e-158 563.9 419 69.5
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 1.3e-158 563.5 420 69.3
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 1.3e-158 563.5 420 68.6
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 1.5e-157 560.1 418 67.2
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 3.3e-157 558.9 421 67.2
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 4.3e-157 558.5 420 68.8
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 6.2e-156 554.7 424 67.0
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 1.1e-155 553.9 445 65.8
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 4.0e-155 552.0 411 67.6
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 5.2e-155 551.6 437 64.8
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 9.0e-155 550.8 418 66.5
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 1.5e-154 550.1 411 67.4
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 2.0e-154 549.7 408 69.4
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 3.4e-154 548.9 416 66.6
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 5.8e-154 548.1 419 66.1
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 9.9e-154 547.4 447 64.7
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 1.7e-153 546.6 413 66.8
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 2.2e-153 546.2 414 68.6
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 4.9e-153 545.0 417 65.7
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 1.4e-152 543.5 410 69.8
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 1.4e-152 543.5 418 66.0
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 2.4e-152 542.7 411 67.6
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 7.1e-152 541.2 418 65.8
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 1.2e-151 540.4 412 67.5
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 3.5e-151 538.9 419 65.4
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 3.5e-151 538.9 418 67.5
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 4.6e-151 538.5 415 68.2
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 4.6e-151 538.5 418 65.6
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 6.0e-151 538.1 412 66.7
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 1.0e-150 537.3 416 65.6
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 2.3e-150 536.2 409 67.5
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 6.6e-150 534.6 428 65.0
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 4.3e-149 531.9 414 68.1
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 5.6e-149 531.6 414 67.1
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 1.3e-148 530.4 415 65.8
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 1.6e-148 530.0 409 67.2
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 4.8e-148 528.5 415 66.7
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 1.4e-147 526.9 416 66.1
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 1.8e-147 526.6 382 69.9
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 3.4e-146 522.3 409 66.7
Gohir.A12G160700 Gossypium hirsutum HOM05D005523 ORTHO05D007089 5.8e-146 521.5 400 67.0
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 3.8e-145 518.8 383 69.5
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 9.3e-144 514.2 397 66.0
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 6.9e-139 498.0 416 62.0
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 1.5e-138 496.9 381 65.4
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 1.2e-135 487.3 427 61.8
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 2.7e-135 486.1 418 63.4
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 6.0e-135 485.0 381 65.6
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 1.1e-133 480.7 431 59.6
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 7.4e-133 478.0 417 60.7
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 3.7e-132 475.7 425 59.8
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 4.8e-132 475.3 316 78.2
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 1.4e-131 473.8 328 72.9
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 5.8e-130 468.4 420 57.6
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 2.2e-129 466.5 390 63.6
VMungo0251G0731 Vigna mungo HOM05D005523 ORTHO05D007089 3.0e-126 456.1 297 75.4
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 5.9e-122 441.8 365 63.0
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 6.5e-113 411.8 419 52.7
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 4.2e-112 409.1 436 53.2
Actinidia36738 Actinidia chinensis HOM05D005523 ORTHO05D007089 1.8e-110 403.7 264 78.8
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 3.8e-105 386.0 411 50.4
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 6.5e-105 385.2 455 46.2
Actinidia14169 Actinidia chinensis HOM05D005523 ORTHO05D007089 7.7e-98 361.7 325 60.9
CDE10G0904 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 1.4e-94 350.9 268 67.5
MBI19_g44450_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 2.7e-90 336.7 268 68.3
BcaC06g31164 Brassica carinata HOM05D005523 ORTHO05D006344 2.9e-89 333.2 199 82.9
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 6.5e-89 332.0 332 54.5
BcaC04g21469 Brassica carinata HOM05D000070 ORTHO05D006344 6.3e-84 315.5 361 50.4
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 9.5e-80 301.6 554 35.0
RcHm_v2.0_Chr7g0182531 Rosa chinensis HOM05D005523 ORTHO05D007089 1.8e-78 297.4 179 80.4
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 1.5e-77 294.3 289 57.8
BolC9t56002H Brassica oleracea HOM05D005523 ORTHO05D007089 2.2e-76 290.4 357 47.6
C09p31430 Brassica napus HOM05D000070 ORTHO05D006344 1.1e-75 288.1 357 47.6
Lsat_1_v5_gn_7_112061 Lactuca sativa HOM05D005523 ORTHO05D007089 3.8e-73 279.6 319 53.3
Lsat_1_v5_gn_5_70240 Lactuca sativa HOM05D005523 ORTHO05D007089 4.7e-71 272.7 188 74.5
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 5.2e-70 269.2 435 37.5
Lsat_1_v5_gn_5_143020 Lactuca sativa HOM05D005523 ORTHO05D007089 2.0e-69 267.3 188 70.7
Cpa.g.sc1.134 Carica papaya HOM05D005523 ORTHO05D007089 9.8e-69 265.0 154 82.5
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 1.9e-64 250.8 220 59.5
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 3.3e-64 250.0 363 41.0
BcaB03g12091 Brassica carinata HOM05D005523 ORTHO05D007089 7.5e-53 212.2 135 77.8
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 3.5e-50 203.4 224 49.6
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 7.8e-50 202.2 196 53.1
Lsat_1_v5_gn_7_82480 Lactuca sativa HOM05D005523 ORTHO05D007089 6.0e-26 122.9 156 51.3
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 3.4e-21 107.1 138 38.4
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 4.5e-21 106.7 65 81.5
Cpa.g.sc1.135 Carica papaya HOM05D005523 ORTHO05D007089 8.2e-15 85.9 50 90.0
CAN.G602.9 Capsicum annuum HOM05D005523 ORTHO05D007089 1.7e-12 78.2 63 63.5
Actinidia36737 Actinidia chinensis HOM05D005523 ORTHO05D007089 4.9e-12 76.6 95 51.6
HanXRQChr16g0520621 Helianthus annuus HOM05D005523 ORTHO05D007089 9.3e-11 72.4 56 67.9
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 1.5e-08 65.1 58 48.3
EL10Ac6g15009 Beta vulgaris HOM05D005523 ORTHO05D007089 4.3e-08 63.5 73 38.4


User provided reference genes

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