Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034600 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D112333 1.5e-38 162.5 90 100.0
CSS0015575 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 4.3e-22 107.8 54 96.3
CSS0033262 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 4.3e-22 107.8 54 96.3
Actinidia06390 Actinidia chinensis HOM05D003136 ORTHO05D003562 1.9e-14 82.4 51 78.4
Dinv12100 Davidia involucrata HOM05D003136 ORTHO05D003562 5.6e-14 80.9 54 72.2
Actinidia21356 Actinidia chinensis HOM05D003136 ORTHO05D003562 1.2e-13 79.7 52 75.0
Cfa004879 Carpinus fangiana HOM05D003136 ORTHO05D003562 7.6e-11 70.5 68 57.4
Haze_05118 Corylus avellana HOM05D003136 ORTHO05D003562 1.7e-10 69.3 68 57.4
vmacro02370 Vaccinium macrocarpon HOM05D003136 ORTHO05D003562 2.2e-10 68.9 52 61.5
QL12p034332 Quercus lobata HOM05D003136 ORTHO05D003562 6.4e-10 67.4 55 65.5
Prupe.2G042900 Prunus persica HOM05D003136 ORTHO05D003562 1.1e-09 66.6 54 59.3
Ciclev10018861m.g Citrus clementina HOM05D003136 ORTHO05D003562 9.3e-09 63.5 54 57.4
CiPaw.08G084600 Carya illinoinensis HOM05D003136 ORTHO05D003562 1.3e-07 59.7 55 58.2
TWI14G1445 Tripterygium wilfordii HOM05D003136 ORTHO05D003562 2.3e-07 58.9 53 58.5
CiPaw.07G123400 Carya illinoinensis HOM05D003136 ORTHO05D003562 3.0e-07 58.5 68 50.0
MD02G1277600 Malus domestica HOM05D003136 ORTHO05D003562 6.6e-07 57.4 54 51.9
RcHm_v2.0_Chr1g0326951 Rosa chinensis HOM05D003136 ORTHO05D003562 6.6e-07 57.4 55 56.4
arahy.Tifrunner.gnm1.ann1.3UY4XW Arachis hypogaea HOM05D003136 ORTHO05D003562 8.7e-07 57.0 54 55.6
Lj2C1213G0 Lonicera japonica HOM05D003136 ORTHO05D003562 8.7e-07 57.0 54 55.6
GSVIVG01028201001 Vitis vinifera HOM05D003136 ORTHO05D003562 8.7e-07 57.0 57 57.9
arahy.Tifrunner.gnm1.ann1.3N4E8I Arachis hypogaea HOM05D003136 ORTHO05D003562 1.1e-06 56.6 54 55.6
TWI59G0671 Tripterygium wilfordii HOM05D003136 ORTHO05D003562 2.5e-06 55.5 53 52.8
Gohir.A12G121400 Gossypium hirsutum HOM05D003136 ORTHO05D003562 3.3e-06 55.1 54 53.7
Gohir.D12G125100 Gossypium hirsutum HOM05D003136 ORTHO05D003562 3.3e-06 55.1 54 53.7
Gorai.008G136100 Gossypium raimondii HOM05D003136 ORTHO05D003562 3.3e-06 55.1 54 53.7
Lalb_Chr04g0260121 Lupinus albus HOM05D003136 ORTHO05D003562 3.3e-06 55.1 54 55.6
Atru.chr5.904 Acer truncatum HOM05D003136 ORTHO05D003562 4.3e-06 54.7 54 53.7
MD07G1045700 Malus domestica HOM05D003136 ORTHO05D003562 5.6e-06 54.3 54 50.0
FAN03G0588 Fragaria x ananassa HOM05D003136 ORTHO05D003562 7.3e-06 53.9 55 52.7
TAR365G0210 Trochodendron aralioides HOM05D003136 ORTHO05D003562 7.3e-06 53.9 55 54.5
TAR365G0734 Trochodendron aralioides HOM05D003136 ORTHO05D003562 7.3e-06 53.9 55 54.5
FAN01G0053 Fragaria x ananassa HOM05D003136 ORTHO05D003562 9.6e-06 53.5 55 52.7


User provided reference genes

Program Settings