Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034597 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 6.5e-19 97.1 77 100.0
CSS0043101 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 4.2e-18 94.4 77 98.7
Actinidia39315 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.5e-10 68.6 77 79.2
Actinidia30473 Actinidia chinensis HOM05D005953 ORTHO05D004056 4.2e-10 67.8 77 79.2
CSS0013664 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 4.2e-10 67.8 77 70.1
CSS0009794 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 2.1e-09 65.5 77 75.3
CSS0043976 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 2.1e-09 65.5 77 75.3
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 3.6e-09 64.7 80 77.5
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.4e-08 62.8 77 67.5
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.3e-08 62.0 77 50.6
vmacro12298 Vaccinium macrocarpon HOM05D005953 ORTHO05D004056 3.9e-08 61.2 78 67.9
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 8.8e-08 60.1 41 78.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.1e-07 59.7 77 63.6
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 4.4e-07 57.8 81 48.1
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.7e-07 57.4 46 67.4
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 7.4e-07 57.0 82 48.8
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.3e-06 56.2 82 46.3
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 1.3e-06 56.2 46 67.4
vmacro09282 Vaccinium macrocarpon HOM05D005953 ORTHO05D004056 1.7e-06 55.8 77 68.8
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 2.2e-06 55.5 41 73.2
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 2.8e-06 55.1 41 63.4
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 2.8e-06 55.1 77 61.0
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 3.7e-06 54.7 46 63.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 4.8e-06 54.3 77 45.5
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 4.8e-06 54.3 39 66.7


User provided reference genes

Program Settings