Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 4.9e-78 294.7 177 100.0
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 1.9e-53 213.0 183 64.5
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 4.6e-52 208.4 177 64.4
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 8.6e-51 204.1 178 62.9
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 9.6e-50 200.7 179 59.8
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 1.6e-49 199.9 180 67.8
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.4e-48 196.1 168 60.7
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 3.1e-48 195.7 96 90.6
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 6.8e-48 194.5 177 59.3
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 6.8e-48 194.5 96 90.6
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 6.8e-48 194.5 96 89.6
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 6.8e-48 194.5 177 59.9
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 4.4e-47 191.8 96 87.5
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 4.4e-47 191.8 96 85.4
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 7.6e-47 191.0 96 85.4
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 7.6e-47 191.0 177 60.5
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.7e-46 189.9 96 85.4
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 85.4
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 2.2e-46 189.5 180 56.7
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 85.4
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 83.3
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 83.3
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 83.3
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 83.3
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 2.2e-46 189.5 96 83.3
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 2.9e-46 189.1 96 86.5
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.9e-46 189.1 96 82.3
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 2.9e-46 189.1 96 84.4
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 2.9e-46 189.1 97 86.6
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 2.9e-46 189.1 97 86.6
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.8e-46 188.7 96 87.5
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.8e-46 188.7 96 87.5
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 3.8e-46 188.7 96 86.5
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 4.9e-46 188.3 178 59.0
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 4.9e-46 188.3 96 82.3
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 4.9e-46 188.3 96 86.5
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 6.4e-46 188.0 96 84.4
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 6.4e-46 188.0 96 84.4
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 8.4e-46 187.6 96 86.5
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 1.1e-45 187.2 178 69.7
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 1.4e-45 186.8 96 86.5
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.9e-45 186.4 96 81.2
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.9e-45 186.4 154 61.7
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 2.4e-45 186.0 96 85.4
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 2.4e-45 186.0 177 55.4
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 2.4e-45 186.0 96 84.4
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 3.2e-45 185.7 96 84.4
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 4.2e-45 185.3 179 57.0
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 4.2e-45 185.3 96 86.5
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 4.2e-45 185.3 96 84.4
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 5.4e-45 184.9 96 84.4
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 5.4e-45 184.9 161 61.5
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 5.4e-45 184.9 177 56.5
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 7.1e-45 184.5 177 56.5
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 9.3e-45 184.1 166 57.2
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 9.3e-45 184.1 177 56.5
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 1.2e-44 183.7 96 83.3
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.2e-44 183.7 95 84.2
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 1.6e-44 183.3 96 82.3
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 1.6e-44 183.3 96 84.4
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.1e-44 183.0 96 83.3
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 2.1e-44 183.0 95 80.0
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 2.7e-44 182.6 96 81.2
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 2.7e-44 182.6 96 81.2
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 2.7e-44 182.6 96 81.2
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 2.7e-44 182.6 96 81.2
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.7e-44 182.6 177 55.9
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 2.7e-44 182.6 177 55.9
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 3.5e-44 182.2 171 55.0
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 3.5e-44 182.2 171 55.0
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 3.5e-44 182.2 96 80.2
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 4.6e-44 181.8 96 80.2
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 4.6e-44 181.8 96 84.4
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 6.0e-44 181.4 96 79.2
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 6.0e-44 181.4 178 56.2
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 7.8e-44 181.0 96 80.2
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 7.8e-44 181.0 163 58.9
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 1.0e-43 180.6 96 82.3
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 1.0e-43 180.6 97 84.5
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.0e-43 180.6 96 80.2
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 1.3e-43 180.3 96 81.2
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 1.3e-43 180.3 96 81.2
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 1.3e-43 180.3 177 56.5
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 2.3e-43 179.5 189 54.5
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 3.0e-43 179.1 96 79.2
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 5.1e-43 178.3 181 56.9
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 5.1e-43 178.3 96 76.0
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 6.6e-43 177.9 96 82.3
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 8.7e-43 177.6 96 79.2
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 1.1e-42 177.2 174 55.7
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 1.5e-42 176.8 184 52.7
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 2.5e-42 176.0 194 51.5
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 2.5e-42 176.0 194 51.0
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 2.5e-42 176.0 177 53.7
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 3.3e-42 175.6 177 54.2
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 3.3e-42 175.6 96 79.2
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 4.3e-42 175.3 96 78.1
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 5.6e-42 174.9 177 53.7
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 9.6e-42 174.1 96 80.2
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 1.6e-41 173.3 96 78.1
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 1.3e-38 163.7 92 76.1
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 1.7e-38 163.3 96 72.9
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 3.8e-38 162.2 91 75.8
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 1.1e-37 160.6 243 40.7
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.7e-35 153.3 88 73.9
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 9.9e-31 137.5 96 64.6
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 8.4e-30 134.4 163 50.3
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 7.1e-29 131.3 180 46.7
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 2.3e-27 126.3 66 77.3
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.3e-27 126.3 143 48.3
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 8.7e-27 124.4 65 86.2
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 4.8e-25 118.6 62 75.8
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 6.2e-25 118.2 61 78.7
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 4.6e-20 102.1 62 64.5
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 6.9e-16 88.2 51 62.7
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 3.8e-14 82.4 51 60.8
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 3.5e-12 75.9 36 97.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 3.9e-11 72.4 35 91.4


User provided reference genes

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