Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034569 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 3.8e-246 854.4 425 100.0
CSS0019220 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 1.1e-205 719.9 425 86.6
CSS0027177 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 3.5e-191 671.8 425 81.9
CSS0032936 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 6.6e-190 667.5 425 82.1
CSS0023467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.9e-169 598.2 442 74.2
CSS0042100 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 9.6e-165 583.9 468 69.7
CSS0019983 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 2.2e-161 572.8 431 73.3
CSS0028975 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.0e-130 469.9 451 61.9
CSS0012880 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 8.1e-87 325.1 308 60.4
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.1e-86 323.2 308 60.1
CSS0045752 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.4e-85 319.3 307 59.6
CSS0030247 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.7e-84 317.4 307 59.6
CSS0018784 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.2e-84 317.0 307 59.3
CSS0023629 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.2e-84 317.0 306 59.2
CSS0015520 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.7e-84 316.2 307 59.3
CSS0041665 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.9e-84 315.8 311 58.2
CSS0043466 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.4e-84 315.5 307 59.0
CSS0012227 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.9e-83 313.9 307 59.0
CSS0009559 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 9.7e-32 142.1 167 50.9
CSS0032227 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.0e-12 79.0 161 39.1
CSS0043873 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.0e-12 79.0 161 39.1
CSS0038372 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D022133 4.2e-11 73.6 157 30.6
CSS0025813 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D022133 3.6e-10 70.5 139 30.2
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.0e-09 67.0 184 34.8
Rhsim05G0178600 Rhododendron simsii HOM05D000279 ORTHO05D000957 2.2e-07 61.2 108 31.5
Rhsim05G0177400 Rhododendron simsii HOM05D000279 ORTHO05D022133 2.8e-07 60.8 155 27.1
CSS0040721 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 4.8e-07 60.1 180 27.2
Rhsim05G0178500 Rhododendron simsii HOM05D000279 ORTHO05D000957 4.8e-07 60.1 121 32.2
CSS0039621 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 8.3e-07 59.3 165 37.0
vmacro20016 Vaccinium macrocarpon HOM05D019504 ORTHO05D022133 8.3e-07 59.3 203 26.1
CSS0012687 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D001748 3.1e-06 57.4 167 31.1


User provided reference genes

Program Settings