Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 4.1e-71 271.2 127 100.0
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.2e-25 120.2 134 49.3
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.5e-25 119.8 126 47.6
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.3e-21 105.9 136 44.9
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-20 102.8 96 54.2
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.3e-20 102.1 102 49.0
CSS0018973 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 6.5e-16 87.8 62 64.5
CSS0022885 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 6.5e-16 87.8 62 64.5
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 5.1e-13 78.2 106 43.4
CSS0007903 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 6.7e-13 77.8 92 47.8
Nitab4.5_0000378g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.3e-12 75.5 129 31.8
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 3.7e-11 72.0 135 29.6
Nitab4.5_0002094g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.8e-11 71.6 139 29.5
Nitab4.5_0000492g0040 Nicotiana tabacum HOM05D000104 ORTHO05D005604 6.3e-11 71.2 129 30.2
Nitab4.5_0000171g0390 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.2e-11 70.9 127 30.7
Nitab4.5_0001360g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.2e-11 70.9 129 30.2
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-10 70.5 107 34.6
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 1.8e-10 69.7 127 33.1
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 2.4e-10 69.3 128 27.3
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-10 69.3 128 27.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 3.1e-10 68.9 129 29.5
Nitab4.5_0010223g0040 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.1e-10 68.9 128 29.7
Nitab4.5_0021418g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-10 68.6 121 30.6
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 5.3e-10 68.2 76 46.1
Nitab4.5_0004344g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.3e-10 68.2 129 31.8
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 6.9e-10 67.8 133 26.3
Nitab4.5_0000687g0070 Nicotiana tabacum HOM05D006502 ORTHO05D004350 6.9e-10 67.8 135 28.1
Nitab4.5_0028560g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.1e-10 67.4 129 29.5
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 1.2e-09 67.0 127 32.3
Nitab4.5_0000108g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-09 66.6 126 30.2
Nitab4.5_0000483g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-09 66.6 129 30.2
Nitab4.5_0000571g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-09 66.6 128 28.9
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 2.0e-09 66.2 119 33.6
Nitab4.5_0000259g0310 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.4e-09 65.5 129 29.5
Nitab4.5_0003553g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.4e-09 65.5 121 30.6
CSS0010442 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 5.9e-09 64.7 49 53.1
Nitab4.5_0000628g0060 Nicotiana tabacum HOM05D001563 ORTHO05D001956 5.9e-09 64.7 126 28.6
Nitab4.5_0001781g0230 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.9e-09 64.7 129 28.7
Nitab4.5_0001171g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.7e-09 64.3 120 30.0
Nitab4.5_0001338g0090 Nicotiana tabacum HOM05D005293 ORTHO05D006764 7.7e-09 64.3 129 28.7
Nitab4.5_0002991g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.7e-09 64.3 129 30.2
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 7.7e-09 64.3 111 32.4
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.0e-08 63.9 101 35.6
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.3e-08 63.5 112 32.1
Nitab4.5_0001360g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-08 63.2 122 31.1
Nitab4.5_0001615g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.7e-08 63.2 125 30.4
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 1.7e-08 63.2 120 25.8
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.7e-08 63.2 107 30.8
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.7e-08 63.2 108 30.6
Nitab4.5_0000197g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-08 62.8 135 25.9
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.2e-08 62.8 119 31.1
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.2e-08 62.8 105 29.5
Nitab4.5_0001526g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.9e-08 62.4 118 29.7
Nitab4.5_0013274g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.9e-08 62.4 117 30.8
Nitab4.5_0002192g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.8e-08 62.0 129 29.5
Nitab4.5_0001263g0050 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.0e-08 61.6 122 28.7
Nitab4.5_0000053g0210 Nicotiana tabacum HOM05D000323 ORTHO05D000201 6.5e-08 61.2 119 29.4
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 6.5e-08 61.2 103 31.1
Nitab4.5_0001025g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.5e-08 61.2 129 27.9
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.5e-08 61.2 120 30.8
Nitab4.5_0026746g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.5e-08 61.2 117 30.8
Nitab4.5_0000076g0260 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.5e-08 60.8 111 31.5
Nitab4.5_0000564g0290 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-07 60.5 122 27.0
Nitab4.5_0007992g0030 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-07 60.5 130 28.5
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 1.4e-07 60.1 119 33.6
Nitab4.5_0002468g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.4e-07 60.1 75 37.3
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.4e-07 60.1 107 27.1
CSS0048052 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 1.9e-07 59.7 137 29.2
Nitab4.5_0003338g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005969 1.9e-07 59.7 126 27.8
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 2.5e-07 59.3 107 28.0
Aqoxy5G00095 Aquilegia oxysepala HOM05D008675 ORTHO05D019673 3.2e-07 58.9 102 32.4
Nitab4.5_0002208g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.2e-07 58.9 118 28.8
Nitab4.5_0001677g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.2e-07 58.5 118 29.7
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.2e-07 58.5 106 24.5
Nn5g28355 Nelumbo nucifera HOM05D023818 ORTHO05D022948 5.5e-07 58.2 115 31.3
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.4e-07 57.4 104 28.8
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-06 57.0 107 28.0
Nitab4.5_0000062g0640 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-06 56.6 120 31.7
Nitab4.5_0000131g0080 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-06 56.2 120 29.2
Nitab4.5_0000401g0100 Nicotiana tabacum HOM05D002342 ORTHO05D002407 2.7e-06 55.8 111 30.6
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.7e-06 55.8 104 26.0
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 6.1e-06 54.7 102 33.3
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 7.9e-06 54.3 147 25.2
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 7.9e-06 54.3 90 33.3
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 7.9e-06 54.3 90 33.3


User provided reference genes

Program Settings