Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.0e-38 161.8 72 100.0
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.3e-37 159.1 72 98.6
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.3e-37 159.1 72 98.6
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.8e-37 157.5 72 97.2
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.1e-36 156.0 72 97.2
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.6e-35 152.1 72 93.1
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.0e-26 122.9 54 96.3
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.3e-25 117.9 57 87.7
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.9e-23 110.2 57 82.5
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 7.1e-20 100.1 62 62.9
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 7.1e-20 100.1 62 62.9
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.2e-16 88.6 54 68.5
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 6.9e-15 83.6 55 61.8
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.0e-14 82.0 55 63.6
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.0e-14 82.0 55 63.6
CSS0025806 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 7.7e-14 80.1 64 54.7
CSS0044145 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 7.7e-14 80.1 55 60.0
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 7.7e-14 80.1 55 58.2
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.4e-12 75.9 55 54.5
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 9.4e-12 73.2 54 50.0
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 3.6e-11 71.2 61 50.8
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 1.4e-10 69.3 54 53.7
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 1.8e-10 68.9 56 53.6
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 1.1e-09 66.2 54 51.9
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.5e-09 65.1 55 54.5
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 2.5e-09 65.1 69 47.8
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 2.5e-09 65.1 68 38.2
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 7.4e-09 63.5 56 50.0
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 7.4e-09 63.5 55 49.1
HanXRQChr04g0105731 Helianthus annuus HOM05D002515 ORTHO05D002722 1.7e-08 62.4 49 53.1
Lsat_1_v5_gn_9_23360 Lactuca sativa HOM05D002515 ORTHO05D002722 2.2e-08 62.0 78 42.3
MD04G1128800 Malus domestica HOM05D002515 ORTHO05D002722 2.8e-08 61.6 57 49.1
Prupe.6G254700 Prunus persica HOM05D002515 ORTHO05D002722 1.4e-07 59.3 68 41.2
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.4e-07 59.3 55 43.6
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.4e-07 59.3 55 43.6
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 1.4e-07 59.3 52 48.1
DCAR_005973 Daucus carota HOM05D002515 ORTHO05D002722 1.8e-07 58.9 54 44.4
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 1.8e-07 58.9 49 53.1
PGSC0003DMG400030320 Solanum tuberosum HOM05D002515 ORTHO05D002722 2.4e-07 58.5 66 33.3
CANSAT54G1460 Cannabis sativa HOM05D002515 ORTHO05D002722 4.1e-07 57.8 54 48.1
ClCG04G004860 Citrullus lanatus HOM05D002515 ORTHO05D002722 5.3e-07 57.4 71 38.0
PGR004G0883 Punica granatum HOM05D002515 ORTHO05D002722 5.3e-07 57.4 61 41.0
MELO3C025918.2 Cucumis melo HOM05D002515 ORTHO05D002722 6.9e-07 57.0 48 47.9
CsaV3_6G016870 Cucumis sativus L. HOM05D002515 ORTHO05D002722 9.1e-07 56.6 48 47.9
Oeu054145.1 Olea europaea HOM05D002515 ORTHO05D002722 9.1e-07 56.6 54 44.4
Solyc06g076130.3 Solanum lycopersicum HOM05D002515 ORTHO05D002722 9.1e-07 56.6 66 33.3
Sopen06g032530 Solanum pennellii HOM05D002515 ORTHO05D002722 9.1e-07 56.6 66 33.3
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 9.1e-07 56.6 54 46.3
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 1.2e-06 56.2 49 49.0
Lsat_1_v5_gn_8_73101 Lactuca sativa HOM05D002515 ORTHO05D002722 1.2e-06 56.2 73 42.5
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 1.2e-06 56.2 54 46.3
PGR119G0741 Punica granatum HOM05D002515 ORTHO05D002722 1.2e-06 56.2 81 37.0
ECA247G2589 Erigeron canadensis HOM05D002515 ORTHO05D002722 1.5e-06 55.8 47 48.9
Potri.016G095500 Populus trichocarpa HOM05D002515 ORTHO05D002722 1.5e-06 55.8 54 46.3
Nitab4.5_0004156g0040 Nicotiana tabacum HOM05D002515 ORTHO05D002722 2.0e-06 55.5 40 52.5
Duzib168G0968 Durio zibethinus HOM05D002515 ORTHO05D002722 2.6e-06 55.1 54 42.6
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 2.6e-06 55.1 54 48.1
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 2.6e-06 55.1 52 44.2
ClCG02G020160 Citrullus lanatus HOM05D002515 ORTHO05D002722 3.4e-06 54.7 48 45.8
Duzib093G1384 Durio zibethinus HOM05D002515 ORTHO05D002722 4.5e-06 54.3 66 40.9
MD12G1141400 Malus domestica HOM05D002515 ORTHO05D002722 5.9e-06 53.9 57 45.6


User provided reference genes

Program Settings