Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.1e-54 216.5 113 100.0
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.0e-40 169.1 158 64.6
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.6e-40 168.7 159 64.2
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 3.7e-31 138.3 90 81.1
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 3.1e-30 135.2 87 81.6
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 3.5e-29 131.7 87 82.8
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 1.9e-27 125.9 87 79.3
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 2.5e-27 125.6 85 77.6
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.2e-26 123.2 86 75.6
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 2.1e-26 122.5 88 72.7
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.8e-26 122.1 168 50.6
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 2.8e-26 122.1 87 74.7
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 6.1e-26 120.9 87 75.9
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 8.0e-26 120.6 87 71.3
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 8.0e-26 120.6 86 73.3
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.0e-25 120.2 83 77.1
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 1.0e-25 120.2 88 73.9
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 1.4e-25 119.8 84 75.0
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 1.8e-25 119.4 92 68.5
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.8e-25 119.4 108 60.2
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 2.3e-25 119.0 84 75.0
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 2.3e-25 119.0 87 69.0
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 3.0e-25 118.6 84 75.0
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 3.0e-25 118.6 87 71.3
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 4.0e-25 118.2 84 78.6
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 4.0e-25 118.2 81 77.8
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 4.0e-25 118.2 84 73.8
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 4.0e-25 118.2 84 75.0
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 4.0e-25 118.2 87 69.0
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 4.0e-25 118.2 87 69.0
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 5.2e-25 117.9 85 72.9
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 5.2e-25 117.9 84 73.8
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 5.2e-25 117.9 87 74.7
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 5.2e-25 117.9 87 71.3
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 5.2e-25 117.9 87 71.3
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 6.8e-25 117.5 84 79.8
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 6.8e-25 117.5 84 79.8
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 6.8e-25 117.5 87 72.4
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 8.9e-25 117.1 87 71.3
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.2e-24 116.7 90 71.1
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 1.2e-24 116.7 88 70.5
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 1.2e-24 116.7 87 71.3
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.2e-24 116.7 84 72.6
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.2e-24 116.7 84 73.8
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 1.5e-24 116.3 85 75.3
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 1.5e-24 116.3 84 72.6
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 1.5e-24 116.3 84 75.0
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.5e-24 116.3 85 72.9
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 1.5e-24 116.3 84 75.0
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.0e-24 115.9 111 65.8
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 3.4e-24 115.2 84 72.6
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 4.4e-24 114.8 101 62.4
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 9.8e-24 113.6 87 66.7
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 9.8e-24 113.6 91 68.1
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 1.3e-23 113.2 88 67.0
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.3e-23 113.2 81 74.1
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 1.3e-23 113.2 88 71.6
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.3e-23 113.2 84 73.8
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.3e-23 113.2 81 76.5
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.3e-23 113.2 81 76.5
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.3e-23 113.2 81 76.5
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 1.7e-23 112.8 84 73.8
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.7e-23 112.8 87 73.6
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 2.2e-23 112.5 96 67.7
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 2.2e-23 112.5 81 75.3
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 2.2e-23 112.5 84 73.8
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 2.2e-23 112.5 87 66.7
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 2.9e-23 112.1 88 71.6
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 2.9e-23 112.1 84 72.6
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 2.9e-23 112.1 90 72.2
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 3.7e-23 111.7 87 72.4
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 3.7e-23 111.7 87 72.4
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 3.7e-23 111.7 87 72.4
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 3.7e-23 111.7 84 73.8
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 4.9e-23 111.3 84 73.8
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 8.3e-23 110.5 84 73.8
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 8.3e-23 110.5 98 63.3
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 8.3e-23 110.5 120 56.7
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 8.3e-23 110.5 87 65.5
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.4e-22 109.8 87 63.2
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.4e-22 109.8 81 74.1
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.4e-22 109.8 89 64.0
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 2.4e-22 109.0 87 66.7
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 1.6e-21 106.3 87 65.5
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.0e-21 105.9 103 58.3
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 2.7e-21 105.5 100 62.0
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 3.5e-21 105.1 88 65.9
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 3.5e-21 105.1 84 69.0
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 4.6e-21 104.8 84 70.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.6e-21 104.8 85 68.2
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.6e-21 104.8 85 68.2
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 5.9e-21 104.4 103 57.3
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 7.8e-21 104.0 100 61.0
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.0e-20 103.6 84 66.7
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 1.0e-20 103.6 84 69.0
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.0e-20 103.6 84 69.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.0e-20 103.6 84 69.0
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.0e-20 103.6 84 69.0
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.9e-20 101.7 84 67.9
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.1e-19 100.1 95 60.0
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.5e-19 99.8 88 64.8
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 2.5e-19 99.0 98 60.2
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 2.8e-18 95.5 94 59.6
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 2.3e-17 92.4 83 60.2
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 5.2e-17 91.3 84 61.9
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 5.2e-17 91.3 83 63.9
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 6.8e-17 90.9 84 59.5
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 1.2e-16 90.1 84 64.3
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 7.5e-16 87.4 51 82.4
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 2.2e-15 85.9 83 60.2
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 6.6e-12 74.3 57 64.9
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 1.5e-11 73.2 74 59.5
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 2.8e-10 68.9 82 48.8
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 6.2e-10 67.8 55 58.2
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 1.1e-09 67.0 50 64.0
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 4.0e-09 65.1 52 61.5


User provided reference genes

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