Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 7.3e-139 497.3 261 100.0
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-124 449.5 269 91.1
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 1.1e-57 227.6 234 57.3
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 2.4e-57 226.5 234 59.0
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 8.5e-55 218.0 234 55.6
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 2.1e-53 213.4 246 54.1
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 6.1e-53 211.8 233 53.6
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 1.5e-51 207.2 235 52.3
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 1.5e-51 207.2 234 52.6
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 5.7e-51 205.3 243 51.0
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 2.2e-50 203.4 233 52.4
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 2.8e-50 203.0 231 52.4
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 8.3e-50 201.4 233 53.2
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 3.1e-49 199.5 233 51.1
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 4.1e-49 199.1 233 51.9
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 9.1e-49 198.0 233 51.1
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 9.1e-49 198.0 233 51.1
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 2.7e-48 196.4 235 50.6
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.7e-48 196.4 233 50.2
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 3.5e-48 196.1 233 50.2
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 7.7e-48 194.9 233 51.5
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 7.7e-48 194.9 233 49.4
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 2.2e-47 193.4 286 43.7
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 6.5e-47 191.8 235 51.5
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 1.9e-46 190.3 233 48.5
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 1.9e-46 190.3 233 49.4
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 5.5e-46 188.7 236 48.7
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 1.6e-45 187.2 234 48.7
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 2.1e-45 186.8 275 46.2
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 4.7e-45 185.7 232 49.6
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 1.0e-44 184.5 203 54.7
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 1.0e-44 184.5 236 48.7
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 3.0e-44 183.0 234 50.0
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 5.2e-44 182.2 262 44.7
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 5.2e-44 182.2 236 47.5
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 6.8e-44 181.8 232 46.6
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 8.8e-44 181.4 238 46.2
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 8.8e-44 181.4 231 48.1
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 8.8e-44 181.4 240 47.9
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 1.2e-43 181.0 234 49.1
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 1.2e-43 181.0 232 48.7
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.5e-43 180.6 233 48.9
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 3.4e-43 179.5 246 45.9
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 3.4e-43 179.5 276 43.5
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 7.5e-43 178.3 233 46.8
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 9.8e-43 177.9 236 47.9
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 1.7e-42 177.2 234 47.4
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 6.3e-42 175.3 234 46.6
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 8.3e-42 174.9 284 42.3
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 8.3e-42 174.9 284 42.6
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 8.3e-42 174.9 284 42.6
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 5.9e-40 168.7 235 45.5
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 7.7e-40 168.3 253 44.7
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 1.0e-39 167.9 281 41.6
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 1.3e-39 167.5 230 45.7
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.3e-39 167.5 243 45.7
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.3e-39 167.5 231 48.1
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 1.7e-39 167.2 236 46.6
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 2.9e-39 166.4 231 46.8
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 6.6e-39 165.2 231 46.8
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 6.6e-39 165.2 234 46.2
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 1.1e-38 164.5 280 40.0
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 2.5e-38 163.3 261 42.1
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 3.3e-38 162.9 230 46.5
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 3.3e-38 162.9 228 45.6
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 5.6e-38 162.2 230 46.5
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 5.6e-38 162.2 201 50.2
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 7.3e-38 161.8 226 46.9
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 9.5e-38 161.4 231 46.8
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 9.5e-38 161.4 228 45.2
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 1.6e-37 160.6 230 46.1
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 2.8e-37 159.8 282 41.5
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 6.1e-37 158.7 231 44.6
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 6.1e-37 158.7 157 57.3
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 1.4e-36 157.5 231 43.7
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 1.4e-36 157.5 231 43.7
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 2.3e-36 156.8 210 47.1
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 4.0e-36 156.0 159 56.6
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 8.9e-36 154.8 231 43.7
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 8.9e-36 154.8 231 43.7
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 1.5e-35 154.1 230 43.9
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 2.0e-35 153.7 213 46.9
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 3.7e-34 149.4 202 48.5
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.1e-33 147.9 223 44.4
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 3.2e-33 146.4 202 47.5
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 2.3e-31 140.2 363 32.5
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 1.2e-27 127.9 234 37.2
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 1.2e-27 127.9 233 39.1
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 2.4e-25 120.2 194 40.2
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 5.4e-25 119.0 160 45.0
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 3.5e-24 116.3 230 36.1
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 4.3e-22 109.4 162 42.0
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 6.8e-20 102.1 231 35.5
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 2.1e-16 90.5 233 33.5
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.1e-12 78.2 105 45.7
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 2.4e-09 67.0 229 27.5
CSS0049190 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 4.6e-08 62.8 107 43.0
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 4.6e-08 62.8 211 28.0
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-07 60.8 116 40.5
CSS0034676 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-07 60.8 88 46.6


User provided reference genes

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