Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.0e-61 240.0 124 100.0
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 4.1e-55 218.0 116 96.6
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.2e-43 179.9 119 71.4
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 4.6e-43 177.9 116 81.0
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.4e-42 176.4 116 75.9
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 6.7e-42 174.1 120 70.8
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 9.7e-41 170.2 117 76.9
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.1e-39 166.8 116 69.0
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.2e-38 163.3 115 69.6
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 2.6e-38 162.2 118 72.9
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 8.5e-37 157.1 116 66.4
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.1e-36 156.8 115 67.0
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 4.2e-36 154.8 116 66.4
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 5.5e-36 154.5 119 64.7
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 5.5e-36 154.5 115 66.1
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 9.4e-36 153.7 115 67.0
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.2e-35 153.3 118 64.4
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.6e-35 152.9 117 63.2
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 3.6e-35 151.8 119 64.7
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 4.7e-35 151.4 115 65.2
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 7.9e-35 150.6 115 64.3
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.4e-34 149.8 116 64.7
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 3.9e-34 148.3 116 64.7
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 5.1e-34 147.9 115 66.1
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 1.1e-33 146.7 115 64.3
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 3.3e-33 145.2 105 70.5
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 4.4e-33 144.8 118 61.0
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.7e-32 142.9 118 61.9
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.2e-32 142.5 118 60.2
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.2e-32 142.5 118 58.5
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 3.7e-32 141.7 119 60.5
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 3.7e-32 141.7 115 63.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 6.3e-32 141.0 119 57.1
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.8e-31 139.4 118 57.6
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 3.1e-31 138.7 123 61.0
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 5.3e-31 137.9 115 61.7
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 5.3e-31 137.9 116 62.9
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 7.0e-31 137.5 117 57.3
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 9.1e-31 137.1 117 63.2
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.6e-30 136.3 117 66.7
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.7e-30 134.0 116 62.1
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.3e-29 133.3 119 58.0
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.7e-29 132.9 119 65.5
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.5e-28 129.8 120 58.3
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.9e-28 129.4 120 58.3
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 5.5e-28 127.9 118 63.6
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 7.2e-28 127.5 117 54.7
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.6e-27 126.3 120 55.0
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.6e-27 126.3 112 57.1
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 6.1e-27 124.4 119 57.1
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 6.1e-27 124.4 112 56.2
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 6.1e-27 124.4 117 59.0
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.4e-26 123.2 119 56.3
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.4e-26 123.2 118 54.2
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.4e-26 123.2 118 55.1
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 8.8e-26 120.6 115 53.9
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.7e-24 116.3 113 53.1
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 2.8e-24 115.5 115 53.9
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 6.3e-24 114.4 106 56.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 3.1e-23 112.1 114 49.1
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 3.1e-23 112.1 114 50.0
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 5.3e-23 111.3 117 48.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.0e-22 109.4 116 48.3
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 2.7e-22 109.0 117 49.6
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 7.7e-22 107.5 115 46.1
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.3e-21 106.7 119 52.9
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.3e-21 106.7 119 51.3
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.3e-21 106.7 96 59.4
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.7e-21 106.3 117 45.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 3.8e-21 105.1 112 50.0
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 3.8e-21 105.1 120 53.3
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 5.0e-21 104.8 119 48.7
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 8.5e-21 104.0 119 47.9
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 8.5e-21 104.0 119 47.9
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.5e-20 103.2 118 49.2
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.5e-20 103.2 119 48.7
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.5e-20 103.2 112 49.1
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 5.5e-20 101.3 112 48.2
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 9.4e-20 100.5 119 45.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 9.4e-20 100.5 119 45.4
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 9.4e-20 100.5 119 45.4
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.7e-19 98.2 119 42.9
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.4e-18 96.7 114 43.9
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.8e-18 96.3 114 43.0
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-17 93.2 91 53.8
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 1.5e-17 93.2 110 43.6
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.6e-17 92.4 114 43.0
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.6e-17 92.4 115 45.2
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 2.8e-16 89.0 115 43.5
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 2.8e-16 89.0 105 41.0
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 4.8e-16 88.2 114 41.2
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.8e-15 86.3 103 43.7
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 7.0e-15 84.3 95 48.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 7.0e-15 84.3 104 41.3
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.6e-14 83.2 114 41.2
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 4.5e-14 81.6 99 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 2.3e-10 69.3 104 32.7
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.6e-09 65.9 43 72.1
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 9.2e-07 57.4 36 72.2
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.7e-06 55.8 39 66.7


User provided reference genes

Program Settings