Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 4.5e-62 241.1 124 100.0
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 2.7e-27 125.6 124 59.7
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.4e-26 123.2 120 60.8
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 2.3e-26 122.5 125 56.8
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 2.3e-26 122.5 124 55.6
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.3e-26 122.5 118 60.2
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.2e-26 121.3 118 59.3
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.5e-25 119.8 123 52.8
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.0e-25 119.4 124 53.2
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.4e-25 118.2 124 54.0
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.7e-24 116.3 108 61.1
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.1e-23 113.6 124 52.4
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 1.8e-23 112.8 130 53.8
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.8e-23 112.8 124 52.4
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.2e-22 110.2 124 48.4
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 1.2e-22 110.2 119 47.9
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.0e-22 109.4 128 57.0
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.5e-20 103.2 124 53.2
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 1.5e-20 103.2 94 56.4
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.5e-20 103.2 126 51.6
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.5e-20 102.4 98 61.2
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.5e-20 102.4 98 61.2
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 9.4e-20 100.5 128 46.9
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 9.4e-20 100.5 121 47.9
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 1.2e-19 100.1 127 50.4
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.2e-19 100.1 95 54.7
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 1.6e-19 99.8 115 47.8
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.1e-19 99.4 125 48.0
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.1e-19 99.4 125 48.0
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 4.7e-19 98.2 104 54.8
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 8.0e-19 97.4 117 49.6
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.4e-18 96.7 90 57.8
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 1.4e-18 96.7 115 53.0
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.0e-18 95.1 125 46.4
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 4.0e-18 95.1 117 47.9
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 4.0e-18 95.1 123 47.2
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 6.8e-18 94.4 97 53.6
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.8e-18 94.4 100 58.0
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.8e-18 94.4 100 58.0
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 8.8e-18 94.0 110 46.4
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.5e-17 93.2 102 58.8
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 1.5e-17 93.2 120 45.8
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.6e-17 92.4 126 49.2
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 3.4e-17 92.0 124 46.0
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 4.4e-17 91.7 118 49.2
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 4.4e-17 91.7 98 52.0
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 9.8e-17 90.5 123 45.5
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 9.8e-17 90.5 120 44.2
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 9.8e-17 90.5 103 45.6
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.3e-16 90.1 129 47.3
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.8e-16 89.0 116 46.6
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 8.3e-16 87.4 119 45.4
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 8.3e-16 87.4 131 45.0
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.4e-15 85.9 122 41.8
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 3.1e-15 85.5 107 49.5
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 4.1e-15 85.1 113 47.8
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 4.1e-15 85.1 97 50.5
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 5.4e-15 84.7 108 50.9
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 5.4e-15 84.7 127 44.9
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 5.4e-15 84.7 116 44.8
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 5.9e-14 81.3 103 47.6
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 7.7e-14 80.9 120 43.3
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.0e-13 80.5 94 45.7
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.7e-13 79.7 129 44.2
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 3.8e-13 78.6 125 40.8
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.8e-13 78.6 106 44.3
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 8.5e-13 77.4 109 44.0
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 8.5e-13 77.4 109 44.0
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.5e-12 76.6 91 48.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 1.9e-12 76.3 106 44.3
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.9e-12 76.3 92 48.9
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 3.2e-12 75.5 101 53.5
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 3.2e-12 75.5 96 42.7
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 3.2e-12 75.5 96 42.7
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 3.2e-12 75.5 118 44.9
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.5e-12 74.7 106 43.4
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 5.5e-12 74.7 126 40.5
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.8e-10 69.7 126 37.3
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 3.0e-10 68.9 114 42.1
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 4.0e-10 68.6 129 39.5
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 5.2e-10 68.2 102 42.2
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 8.8e-10 67.4 96 42.7
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.5e-09 66.6 102 41.2
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 1.5e-09 66.6 78 47.4
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 5.7e-09 64.7 121 37.2
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 2.2e-08 62.8 125 36.0
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 2.2e-08 62.8 99 44.4
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.2e-08 62.8 60 51.7
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 3.7e-08 62.0 120 39.2
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.7e-08 62.0 52 57.7
ECA232G5064 Erigeron canadensis HOM05D007637 ORTHO05D009508 6.3e-08 61.2 76 50.0
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 3.1e-07 58.9 117 33.3
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 3.1e-07 58.9 123 34.1
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 1.2e-06 57.0 124 33.9
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.0e-06 56.2 90 38.9
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.7e-06 55.8 110 40.9
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 5.9e-06 54.7 51 51.0


User provided reference genes

Program Settings