Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034361 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 2.1e-63 245.4 112 100.0
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 5.0e-36 154.5 130 63.1
Duzib138G0347 Durio zibethinus HOM05D004940 ORTHO05D007805 1.8e-33 146.0 149 53.7
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 3.0e-33 145.2 149 52.3
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 3.9e-33 144.8 152 52.6
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 6.7e-33 144.1 148 53.4
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 8.8e-33 143.7 149 53.0
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 2.0e-32 142.5 149 51.0
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 4.4e-32 141.4 149 51.7
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 5.7e-32 141.0 147 51.7
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 9.7e-32 140.2 149 54.4
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 9.7e-32 140.2 149 54.4
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 1.3e-31 139.8 149 49.7
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 2.2e-31 139.0 149 51.7
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 2.8e-31 138.7 149 50.3
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 2.8e-31 138.7 147 51.0
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 2.8e-31 138.7 149 50.3
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 3.7e-31 138.3 148 50.0
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 3.7e-31 138.3 148 50.7
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 6.3e-31 137.5 147 51.0
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 6.3e-31 137.5 149 51.0
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 8.2e-31 137.1 149 51.0
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 8.2e-31 137.1 149 51.7
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 1.1e-30 136.7 178 46.1
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 1.4e-30 136.3 149 49.7
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 1.8e-30 136.0 149 50.3
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 2.4e-30 135.6 149 51.7
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 3.1e-30 135.2 149 49.7
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 3.1e-30 135.2 148 50.0
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 4.1e-30 134.8 149 50.3
PSO832G3423 Papaver somniferum HOM05D004940 ORTHO05D007805 4.1e-30 134.8 149 50.3
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 5.3e-30 134.4 148 49.3
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 6.9e-30 134.0 147 49.7
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 9.1e-30 133.7 152 50.0
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 9.1e-30 133.7 111 59.5
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 1.2e-29 133.3 147 48.3
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 1.2e-29 133.3 149 49.0
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 1.2e-29 133.3 151 49.0
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 1.5e-29 132.9 150 49.3
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 1.5e-29 132.9 149 47.0
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 2.0e-29 132.5 150 49.3
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 3.4e-29 131.7 149 49.7
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 5.9e-29 131.0 162 46.9
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 1.3e-28 129.8 152 49.3
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 1.3e-28 129.8 149 47.7
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 1.7e-28 129.4 148 47.3
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 1.7e-28 129.4 148 47.3
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 2.2e-28 129.0 152 48.0
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 2.2e-28 129.0 111 57.7
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 2.9e-28 128.6 149 47.7
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 2.9e-28 128.6 149 47.0
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 8.5e-28 127.1 149 47.0
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 1.1e-27 126.7 149 48.3
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 1.4e-27 126.3 149 47.0
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 1.9e-27 125.9 152 46.1
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 1.9e-27 125.9 148 47.3
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 3.2e-27 125.2 151 45.7
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 5.5e-27 124.4 110 54.5
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 7.2e-27 124.0 148 47.3
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 9.4e-27 123.6 147 47.6
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 1.2e-26 123.2 148 45.9
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 1.2e-26 123.2 148 45.9
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 1.2e-26 123.2 148 45.9
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 1.2e-26 123.2 174 40.8
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 1.2e-26 123.2 147 44.9
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 1.6e-26 122.9 130 50.0
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 2.1e-26 122.5 110 54.5
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.7e-26 122.1 149 46.3
CSS0008401 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 3.6e-26 121.7 58 96.6
CSS0049470 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 3.6e-26 121.7 58 96.6
Atru.chr5.1783 Acer truncatum HOM05D004940 ORTHO05D007805 4.7e-26 121.3 152 46.1
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 4.7e-26 121.3 152 46.1
CSS0026527 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 4.7e-26 121.3 58 96.6
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 6.1e-26 120.9 148 45.9
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 6.1e-26 120.9 148 45.9
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 6.1e-26 120.9 152 45.4
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 6.1e-26 120.9 148 43.2
CSS0033490 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 8.0e-26 120.6 58 96.6
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 8.0e-26 120.6 148 45.9
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 8.0e-26 120.6 147 46.9
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 1.0e-25 120.2 148 45.9
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 1.0e-25 120.2 148 45.9
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 1.0e-25 120.2 152 43.4
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 1.4e-25 119.8 148 45.3
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 1.4e-25 119.8 152 43.4
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 1.8e-25 119.4 139 46.0
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 5.2e-25 117.9 148 45.3
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 5.2e-25 117.9 148 45.3
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 5.2e-25 117.9 148 45.3
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 5.2e-25 117.9 148 45.3
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 6.7e-25 117.5 117 51.3
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 6.7e-25 117.5 117 51.3
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.0e-24 115.9 130 48.5
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 2.6e-24 115.5 111 53.2
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 2.6e-24 115.5 110 51.8
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 2.6e-24 115.5 110 51.8
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 5.7e-24 114.4 149 45.0
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 5.7e-24 114.4 149 43.0
Lj1C71G15 Lonicera japonica HOM05D004940 ORTHO05D007805 4.8e-23 111.3 61 82.0
COL.COLO4_36581 Corchorus olitorius HOM05D004940 ORTHO05D007805 8.2e-23 110.5 57 82.5
Prupe.8G218700 Prunus persica HOM05D004940 ORTHO05D007805 1.1e-22 110.2 69 71.0
Lj1C79T2 Lonicera japonica HOM05D004940 ORTHO05D007805 1.8e-22 109.4 57 87.7
SEGI_08888 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 3.1e-22 108.6 152 42.1
Lj1A78G31 Lonicera japonica HOM05D004940 ORTHO05D007805 9.1e-22 107.1 56 87.5
SHI09711 Sapria himalayana HOM05D004940 ORTHO05D018819 3.5e-21 105.1 88 58.0
Gohir.A08G045700 Gossypium hirsutum HOM05D004940 ORTHO05D007805 5.9e-21 104.4 57 86.0
CSS0024627 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.0e-20 103.6 51 96.1
CSS0048666 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.0e-20 103.6 51 96.1
DCAR_018506 Daucus carota HOM05D004940 ORTHO05D007805 1.9e-19 99.4 58 75.9
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 2.5e-19 99.0 136 41.9
SGA_v2.0_scaffold1G00640 Striga asiatica HOM05D004940 ORTHO05D007805 1.6e-18 96.3 56 76.8
Peaxi162Scf00415g00416 Petunia axillaris HOM05D004940 ORTHO05D007805 2.1e-18 95.9 58 75.9
Manes.13G037500 Manihot esculenta HOM05D004940 ORTHO05D007805 6.1e-18 94.4 56 76.8
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 1.8e-17 92.8 147 38.8
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.3e-17 92.4 56 71.4
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 2.3e-17 92.4 112 42.9
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 4.0e-17 91.7 146 36.3
HPP92_012808 Vanilla planifolia HOM05D004940 ORTHO05D007805 5.2e-17 91.3 124 44.4
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 1.2e-16 90.1 107 43.0
CSS0050068 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 6.5e-12 74.3 32 100.0
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 2.7e-10 68.9 54 55.6
CSS0004187 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 1.4e-06 56.6 64 48.4
CSS0032793 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 1.4e-06 56.6 64 48.4


User provided reference genes

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