Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.1e-31 139.4 75 100.0
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 7.4e-28 126.7 97 77.3
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 1.2e-22 109.4 71 81.7
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 1.6e-22 109.0 74 75.7
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 4.7e-22 107.5 96 64.6
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 6.1e-22 107.1 71 78.9
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 8.0e-22 106.7 75 73.3
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 8.8e-21 103.2 96 60.4
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.5e-20 102.4 96 62.5
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.5e-20 102.4 96 62.5
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 3.3e-20 101.3 96 61.5
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 4.4e-20 100.9 96 61.5
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.7e-20 99.8 96 60.4
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 1.3e-19 99.4 96 60.4
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 1.3e-19 99.4 95 62.1
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.7e-19 99.0 96 60.4
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.7e-19 99.0 94 61.7
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 2.2e-19 98.6 96 57.3
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 2.2e-19 98.6 96 56.2
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 2.2e-19 98.6 94 61.7
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 6.3e-19 97.1 96 59.4
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 8.2e-19 96.7 94 59.6
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 8.2e-19 96.7 96 59.4
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 1.1e-18 96.3 96 59.4
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 1.1e-18 96.3 96 60.4
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 1.4e-18 95.9 96 58.3
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 1.8e-18 95.5 94 59.6
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 2.4e-18 95.1 96 58.3
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 2.4e-18 95.1 96 58.3
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 2.4e-18 95.1 94 56.4
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 3.1e-18 94.7 94 60.6
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 4.1e-18 94.4 103 54.4
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 4.1e-18 94.4 96 57.3
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 4.1e-18 94.4 96 57.3
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 4.1e-18 94.4 93 60.2
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 4.1e-18 94.4 95 57.9
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 4.1e-18 94.4 96 57.3
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 5.3e-18 94.0 95 55.8
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 5.3e-18 94.0 94 60.6
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 7.0e-18 93.6 96 58.3
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 9.1e-18 93.2 96 58.3
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 9.1e-18 93.2 96 58.3
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.2e-17 92.8 94 58.5
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 2.0e-17 92.0 96 55.2
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 2.0e-17 92.0 94 57.4
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 2.0e-17 92.0 95 55.8
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 2.6e-17 91.7 96 55.2
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.6e-17 91.7 95 55.8
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 3.5e-17 91.3 95 56.8
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 4.5e-17 90.9 95 55.8
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 5.9e-17 90.5 94 56.4
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 7.7e-17 90.1 94 55.3
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 7.7e-17 90.1 96 59.4
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 7.7e-17 90.1 87 59.8
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 7.7e-17 90.1 94 54.3
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 1.0e-16 89.7 94 55.3
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 1.0e-16 89.7 94 57.4
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 1.3e-16 89.4 102 53.9
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 1.7e-16 89.0 96 53.1
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 1.7e-16 89.0 94 55.3
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.9e-16 88.2 92 56.5
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 2.9e-16 88.2 96 52.1
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.9e-16 88.2 94 55.3
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 2.9e-16 88.2 94 56.4
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 3.8e-16 87.8 92 55.4
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 6.5e-16 87.0 95 51.6
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 8.5e-16 86.7 94 51.1
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 8.5e-16 86.7 95 53.7
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.1e-15 86.3 94 55.3
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 1.5e-15 85.9 94 54.3
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.5e-15 85.9 94 54.3
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.5e-15 85.9 94 54.3
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.5e-15 85.9 96 55.2
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.5e-15 85.9 89 55.1
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 2.5e-15 85.1 93 58.1
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 4.2e-15 84.3 99 50.5
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 4.2e-15 84.3 99 50.5
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 4.2e-15 84.3 94 52.1
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 4.2e-15 84.3 93 54.8
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 4.2e-15 84.3 92 56.5
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 4.2e-15 84.3 90 55.6
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 5.5e-15 84.0 93 55.9
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 5.5e-15 84.0 93 57.0
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 9.4e-15 83.2 94 53.2
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 9.4e-15 83.2 94 51.1
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 1.6e-14 82.4 94 52.1
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 2.7e-14 81.6 93 54.8
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 2.7e-14 81.6 93 54.8
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 2.7e-14 81.6 93 54.8
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.7e-14 81.6 93 52.7
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.7e-14 81.6 95 51.6
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 3.6e-14 81.3 94 55.3
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 3.6e-14 81.3 93 55.9
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 3.6e-14 81.3 99 48.5
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 3.6e-14 81.3 93 54.8
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 3.6e-14 81.3 93 54.8
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 3.6e-14 81.3 93 53.8
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 4.7e-14 80.9 93 52.7
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 6.1e-14 80.5 94 48.9
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 1.0e-13 79.7 91 53.8
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.8e-13 79.0 96 50.0
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 5.7e-12 73.9 93 47.3
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 1.3e-11 72.8 90 51.1
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 2.4e-10 68.6 74 56.8
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 4.1e-10 67.8 91 45.1
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 9.1e-10 66.6 93 43.0
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 8.5e-08 60.1 41 70.7
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.9e-07 58.9 40 75.0
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 7.2e-07 57.0 41 70.7
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 7.2e-07 57.0 41 70.7
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.2e-06 56.2 90 41.1
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 6.1e-06 53.9 41 65.9
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 6.1e-06 53.9 40 67.5


User provided reference genes

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