Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034290 Camellia sinensis var. sinensis HOM05D008473 ORTHO05D000921 5.8e-138 494.2 245 100.0
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.1e-96 357.1 279 70.3
CSS0006884 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.2e-84 316.2 254 65.4
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.8e-83 313.2 248 69.4
CSS0032086 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 5.2e-78 295.0 159 94.3
CSS0011559 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.1e-71 271.6 253 63.2
CSS0023692 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.0e-70 269.2 261 59.8
CSS0035449 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 7.0e-67 258.1 174 76.4
CSS0033827 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 1.7e-65 253.4 159 83.0
CSS0042299 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 7.7e-58 228.0 246 52.8
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 1.2e-26 124.4 243 36.2
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.1e-19 101.3 260 30.0
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 9.2e-19 98.2 281 29.2
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 3.5e-18 96.3 271 26.9
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 7.8e-18 95.1 169 38.5
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 1.0e-17 94.7 281 28.5
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.7e-17 94.0 274 28.8
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-16 90.9 279 29.4
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 1.5e-16 90.9 163 40.5
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 2.8e-15 86.7 278 25.9
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 3.6e-15 86.3 273 25.6
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 6.2e-15 85.5 250 26.8
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.1e-14 84.7 282 25.2
CSS0009426 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-14 84.3 229 30.6
CSS0039380 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-14 84.3 227 30.8
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 1.4e-14 84.3 175 32.6
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 1.4e-14 84.3 164 36.0
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 1.4e-14 84.3 178 32.6
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 1.5e-13 80.9 259 28.6
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.5e-13 80.9 282 25.5
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 2.0e-13 80.5 276 28.3
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 2.6e-13 80.1 164 35.4
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.6e-13 80.1 241 29.5
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.1e-11 74.7 235 28.1
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 1.9e-11 73.9 164 29.9
CSS0040342 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.2e-11 72.8 199 31.7
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 4.2e-11 72.8 191 32.5
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 5.4e-11 72.4 172 32.0
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 1.2e-10 71.2 180 27.2
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 4.6e-10 69.3 129 30.2
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 6.0e-10 68.9 180 26.7
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-09 68.2 208 30.8
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.3e-09 67.8 157 27.4
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-09 67.8 204 31.4
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.3e-09 67.0 260 25.4
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.9e-09 66.2 163 31.9
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 3.9e-09 66.2 264 26.9
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 3.9e-09 66.2 251 27.5
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 3.9e-09 66.2 282 27.3
PGR102G0976 Punica granatum HOM05D003171 ORTHO05D000921 5.1e-09 65.9 172 30.2
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 6.6e-09 65.5 172 30.2
PGR102G1281 Punica granatum HOM05D003171 ORTHO05D000921 6.6e-09 65.5 172 30.2
Dinv07352 Davidia involucrata HOM05D008473 ORTHO05D000921 8.7e-09 65.1 235 24.7
Dinv34380 Davidia involucrata HOM05D008473 ORTHO05D000921 8.7e-09 65.1 233 28.3
Dinv32769 Davidia involucrata HOM05D008473 ORTHO05D000921 1.1e-08 64.7 237 28.7
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 2.5e-08 63.5 272 27.6
Dinv01610 Davidia involucrata HOM05D008473 ORTHO05D000921 3.3e-08 63.2 235 24.7
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 4.3e-08 62.8 260 23.8
CANSAT35G0983 Cannabis sativa HOM05D003171 ORTHO05D000921 7.3e-08 62.0 76 42.1
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 7.3e-08 62.0 164 26.2
CSS0009593 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 9.6e-08 61.6 149 30.9
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 61.2 171 28.1
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 61.2 171 28.1
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 2.8e-07 60.1 129 38.8
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 2.8e-07 60.1 70 42.9
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 3.6e-07 59.7 171 28.1
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 4.8e-07 59.3 180 28.3
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 4.8e-07 59.3 171 28.7
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.1e-06 58.2 174 25.9
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 1.1e-06 58.2 257 24.9
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.4e-06 57.8 154 26.6
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 1.8e-06 57.4 265 24.9
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 2.4e-06 57.0 281 23.8
Dinv14632 Davidia involucrata HOM05D008473 ORTHO05D000921 3.1e-06 56.6 94 43.6
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 4.0e-06 56.2 247 25.5
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 4.0e-06 56.2 265 24.5
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 4.0e-06 56.2 206 27.7
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 5.3e-06 55.8 79 41.8
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 5.3e-06 55.8 267 24.0
Dinv06126 Davidia involucrata HOM05D008473 ORTHO05D009617 6.9e-06 55.5 79 43.0
Dinv15517 Davidia involucrata HOM05D008473 ORTHO05D000921 9.0e-06 55.1 65 43.1
Dinv21256 Davidia involucrata HOM05D008473 ORTHO05D000921 9.0e-06 55.1 65 43.1


User provided reference genes

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