Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034265 Camellia sinensis var. sinensis HOM05D000830 ORTHO05D003205 2.2e-111 405.6 201 100.0
Dinv33851 Davidia involucrata HOM05D000830 ORTHO05D003205 3.6e-53 212.2 144 73.6
Hma1.2p1_2026F.1_g311560 Hydrangea macrophylla HOM05D000830 ORTHO05D003205 2.3e-47 193.0 165 61.2
Rhsim10G0055400 Rhododendron simsii HOM05D000830 ORTHO05D003205 5.6e-46 188.3 144 64.6
Manes.02G057900 Manihot esculenta HOM05D000830 ORTHO05D003205 2.3e-44 183.0 144 64.6
Prupe.3G250700 Prunus persica HOM05D000830 ORTHO05D003205 1.5e-43 180.3 147 63.3
FvH4_6g46550 Fragaria vesca HOM05D000830 ORTHO05D003205 2.2e-42 176.4 147 62.6
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.7e-42 175.6 147 61.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.4e-42 174.9 147 61.9
RcHm_v2.0_Chr2g0165191 Rosa chinensis HOM05D000830 ORTHO05D003205 1.1e-41 174.1 144 61.8
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 7.0e-41 171.4 166 56.6
Aqoxy3G03649 Aquilegia oxysepala HOM05D000830 ORTHO05D003205 2.7e-40 169.5 143 57.3
Thecc.04G103700 Theobroma cacao HOM05D000830 ORTHO05D003205 7.8e-40 167.9 147 59.2
Potri.004G116900 Populus trichocarpa HOM05D000830 ORTHO05D003205 3.3e-38 162.5 148 62.2
Oeu004420.1 Olea europaea HOM05D000830 ORTHO05D003205 7.3e-38 161.4 132 62.1
Gorai.001G208400 Gossypium raimondii HOM05D000830 ORTHO05D003205 1.6e-37 160.2 189 49.2
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 3.6e-37 159.1 147 59.9
Gohir.D07G187500 Gossypium hirsutum HOM05D000830 ORTHO05D003205 4.7e-37 158.7 189 48.7
Nn3g17495 Nelumbo nucifera HOM05D000830 ORTHO05D003205 8.1e-37 157.9 163 54.0
Gohir.A07G181000 Gossypium hirsutum HOM05D000830 ORTHO05D003205 1.8e-36 156.8 189 47.6
MD17G1063800 Malus domestica HOM05D000830 ORTHO05D003205 1.8e-36 156.8 162 52.5
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.4e-34 148.3 167 51.5
COL.COLO4_03894 Corchorus olitorius HOM05D000830 ORTHO05D003205 1.0e-31 141.0 149 53.0
ATR0827G183 Amborella trichopoda HOM05D000830 ORTHO05D003205 1.0e-15 87.8 176 35.8
Hma1.2p1_1555F.1_g290500 Hydrangea macrophylla HOM05D000830 ORTHO05D003205 2.5e-14 83.2 75 61.3
PGR004G2710 Punica granatum HOM05D000830 ORTHO05D003205 4.8e-13 79.0 99 47.5
Eucgr.I02052 Eucalyptus grandis HOM05D000830 ORTHO05D003205 1.8e-12 77.0 51 66.7
Actinidia33557 Actinidia chinensis HOM05D000830 ORTHO05D003205 7.4e-06 55.1 44 59.1


User provided reference genes

Program Settings