Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 0.0e+00 1115.9 649 100.0
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.8e-85 318.9 559 38.1
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 5.8e-44 183.3 280 36.4
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.4e-42 177.9 276 37.0
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 6.6e-40 169.9 288 33.3
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.6e-36 157.9 336 31.5
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.4e-36 157.1 246 37.4
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.4e-36 157.1 246 37.0
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.9e-34 151.8 316 31.6
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.2e-34 151.0 284 31.0
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-34 150.6 305 30.8
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 5.4e-34 150.2 319 30.1
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-34 149.8 306 31.0
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-33 149.1 306 31.0
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-33 148.7 284 31.0
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-33 148.7 305 30.5
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.5e-33 147.5 284 30.6
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.5e-33 147.5 293 31.1
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-33 147.5 293 31.1
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-33 147.1 306 30.7
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.6e-33 147.1 256 33.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-33 146.4 293 31.1
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-32 146.0 306 31.0
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-32 145.2 484 25.2
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.7e-32 145.2 363 28.7
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.9e-32 144.1 313 28.4
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-32 143.3 484 25.0
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-32 143.3 250 31.2
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 2.5e-31 141.4 282 29.4
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.3e-31 141.0 257 30.7
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.3e-31 141.0 365 29.3
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-31 140.6 264 29.9
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-31 140.2 311 28.6
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-31 140.2 249 32.5
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.6e-31 140.2 412 27.2
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-31 139.8 311 28.6
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-31 139.8 311 28.6
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 2.1e-30 138.3 282 29.8
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-30 138.3 282 29.8
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.2e-30 136.7 278 29.9
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.1e-30 136.3 292 31.2
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 1.1e-29 136.0 258 28.3
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.4e-29 134.8 242 34.3
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 3.1e-29 134.4 290 30.0
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 3.1e-29 134.4 290 30.0
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.3e-29 133.7 290 30.0
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.0e-29 132.9 381 27.8
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.9e-28 129.4 355 27.9
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.3e-27 129.0 252 32.1
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-27 128.6 319 29.8
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.2e-27 128.3 319 29.8
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.9e-27 127.9 355 27.9
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.9e-27 127.9 298 30.2
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.4e-27 126.3 321 28.3
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.4e-26 125.6 261 30.7
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-26 125.2 248 29.8
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.2e-26 124.4 252 29.4
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.2e-26 124.4 252 29.4
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 3.2e-26 124.4 254 28.0
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 3.2e-26 124.4 318 27.7
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-26 123.6 493 26.2
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.4e-26 123.6 232 36.2
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.5e-25 120.9 252 29.0
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.6e-25 120.6 321 28.0
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.6e-25 120.6 253 30.0
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 7.9e-25 119.8 230 30.4
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 1.0e-24 119.4 218 35.3
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.3e-24 119.0 203 33.5
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 1.8e-24 118.6 260 27.7
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.3e-24 118.2 328 28.7
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.0e-24 117.9 214 32.7
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 8.7e-24 116.3 242 27.7
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-23 115.9 251 29.9
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-23 115.5 211 29.9
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.6e-23 113.6 163 35.6
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.8e-22 110.5 366 25.1
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.2e-22 110.2 245 30.2
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-21 109.4 168 34.5
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.8e-21 108.6 438 24.7
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.4e-21 108.2 282 27.0
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.1e-21 107.8 168 33.9
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 9.0e-21 106.3 222 28.4
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.5e-20 105.5 149 34.2
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 5.8e-20 103.6 265 27.2
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.9e-20 102.8 202 28.7
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 2.9e-19 101.3 275 28.4
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 3.8e-19 100.9 229 27.1
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 3.8e-19 100.9 255 27.1
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 4.9e-19 100.5 245 27.3
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-19 100.1 257 26.8
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 8.4e-19 99.8 216 28.2
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-18 99.4 160 32.5
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-18 99.4 203 28.1
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.4e-18 99.0 166 32.5
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.4e-18 98.2 248 28.2
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.2e-18 97.8 125 36.0
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.5e-18 97.1 133 33.8
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 5.5e-18 97.1 254 26.8
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-18 96.7 170 32.4
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.3e-18 96.3 133 34.6
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 1.6e-17 95.5 240 26.7
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.6e-17 95.5 261 24.9
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.1e-17 95.1 321 26.5
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.5e-17 94.4 133 35.3
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 6.0e-17 93.6 243 26.3
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 7.9e-17 93.2 297 26.9
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.0e-16 92.8 318 25.5
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.8e-16 92.0 276 27.5
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 2.3e-16 91.7 218 22.9
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 3.0e-16 91.3 192 28.1
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 8.7e-16 89.7 219 26.9
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 8.7e-16 89.7 216 27.8
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-15 89.4 133 33.1
PSO384G1968 Papaver somniferum HOM05D020661 ORTHO05D010137 2.5e-15 88.2 314 24.2
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.4e-15 86.7 168 31.0
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 9.6e-15 86.3 184 29.3
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 3.7e-14 84.3 242 26.0
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 4.8e-14 84.0 303 25.4
PSO063G6468 Papaver somniferum HOM05D008588 ORTHO05D010137 5.3e-13 80.5 142 30.3
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 5.3e-13 80.5 142 31.0
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.9e-13 80.1 352 22.2
FAN14G3515 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.2e-12 79.3 225 26.7
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 1.5e-12 79.0 115 33.9
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 2.0e-12 78.6 362 23.2
MBI01_g19130_MAGBIO Magnolia biondii HOM05D029362 ORTHO05D022891 3.4e-12 77.8 205 26.8
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.4e-12 77.8 197 25.9
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.4e-12 77.8 197 25.9
FAN06G0107 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.5e-12 77.4 221 24.4
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-12 77.4 286 23.1
FvH4_6g33380 Fragaria vesca HOM05D001313 ORTHO05D001590 7.6e-12 76.6 363 23.7
FAN09G0479 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-12 76.6 255 23.1
FAN13G0579 Fragaria x ananassa HOM05D001313 ORTHO05D008319 7.6e-12 76.6 255 23.1
FAN18G0736 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-12 76.6 255 23.9
FAN19G2316 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-12 76.6 221 24.4
FAN20G1515 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-12 76.6 255 23.1
FAN05G1624 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-11 76.3 255 23.1
FAN16G0195 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-11 76.3 255 23.1
FAN21G0188 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-11 76.3 255 23.1
FAN23G3035 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-11 76.3 255 23.1
FAN16G1497 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-11 75.9 255 23.1
FAN18G2179 Fragaria x ananassa HOM05D001313 ORTHO05D013602 1.3e-11 75.9 255 23.1
FAN02G4545 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.7e-11 75.5 255 23.1
FAN25G0192 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.7e-11 75.5 255 23.1
FAN02G0978 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.2e-11 75.1 193 25.4
FAN16G3538 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.2e-11 75.1 255 23.1
FAN20G2634 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.2e-11 75.1 255 23.1
FAN06G0820 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.9e-11 74.7 255 23.1
FAN09G0894 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.9e-11 73.9 254 22.8
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.5e-11 73.6 165 27.3
FAN12G0223 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.8 227 23.3
FAN24G1121 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.0 255 22.7
Aqoxy2G02824 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 3.2e-10 71.2 162 30.2
PSO782G4775 Papaver somniferum HOM05D039725 ORTHO05D010137 3.2e-10 71.2 294 22.8
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-10 71.2 101 32.7
FAN02G2220 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.3e-10 69.7 224 27.2
Actinidia12982 Actinidia chinensis HOM05D007376 ORTHO05D001590 2.7e-09 68.2 76 36.8
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-09 68.2 107 33.6
AUR62029727 Chenopodium quinoa HOM05D000176 ORTHO05D000106 6.0e-09 67.0 226 23.9
Aqoxy5G03387 Aquilegia oxysepala HOM05D000681 ORTHO05D019678 7.9e-09 66.6 334 24.0
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-08 66.2 226 26.5
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 1.0e-08 66.2 177 28.2
AUR62006387 Chenopodium quinoa HOM05D000176 ORTHO05D000106 2.3e-08 65.1 234 25.2
Nn5g26857 Nelumbo nucifera HOM05D000176 ORTHO05D000106 2.3e-08 65.1 212 26.9
PSO104G0253 Papaver somniferum HOM05D009650 ORTHO05D011166 3.0e-08 64.7 119 25.2
vmacro22682 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.0e-08 64.7 149 26.8
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.7e-08 63.5 218 25.7
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 1.5e-07 62.4 252 23.0
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-07 62.0 107 27.1
Aqoxy5G02562 Aquilegia oxysepala HOM05D001313 ORTHO05D001590 2.5e-07 61.6 138 21.7
PSO063G4030 Papaver somniferum HOM05D008588 ORTHO05D010137 7.4e-07 60.1 114 28.1
PSO675G2347 Papaver somniferum HOM05D008588 ORTHO05D010137 7.4e-07 60.1 114 28.1
CSS0018286 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.7e-07 59.7 68 45.6
PSO566G0023 Papaver somniferum HOM05D008588 ORTHO05D010137 2.1e-06 58.5 106 28.3
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-06 57.8 100 36.0
CSS0042148 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.8e-06 57.4 68 44.1
CSS0022351 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 8.2e-06 56.6 76 36.8
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-06 56.6 78 37.2


User provided reference genes

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