Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 9.4e-127 456.8 224 100.0
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 9.4e-127 456.8 224 100.0
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.8e-91 339.0 225 72.9
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 5.9e-89 331.3 224 71.4
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 2.6e-84 315.8 227 68.7
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 5.9e-81 304.7 224 66.5
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.1e-79 300.4 224 63.8
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 2.6e-76 289.3 224 63.4
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.4e-74 283.5 224 62.1
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.9e-74 283.1 200 65.0
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.2e-73 280.4 220 61.4
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 2.7e-73 279.3 228 59.2
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 6.0e-73 278.1 224 59.8
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 5.6e-71 271.6 224 57.6
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.1e-69 267.3 225 57.8
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 1.2e-68 263.8 225 57.3
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.5e-68 263.5 228 57.9
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 5.8e-68 261.5 227 56.4
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 4.1e-66 255.4 228 57.0
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 7.1e-66 254.6 224 58.0
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 9.2e-66 254.2 228 57.0
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 9.2e-66 254.2 230 59.1
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.2e-65 253.8 195 60.5
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.6e-65 253.4 199 60.8
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.7e-65 252.7 227 56.4
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.5e-65 252.3 228 56.1
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.7e-64 250.0 232 55.2
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 3.0e-64 249.2 225 56.0
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 5.1e-64 248.4 235 53.2
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 6.6e-64 248.1 235 52.3
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 8.6e-64 247.7 229 55.5
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.3e-63 245.7 232 50.9
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.6e-62 243.4 229 55.5
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 6.2e-62 241.5 195 57.9
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 4.4e-60 235.3 253 47.4
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.7e-59 233.4 227 51.5
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 2.2e-59 233.0 227 52.4
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 3.7e-59 232.3 227 52.0
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 8.4e-59 231.1 225 52.4
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.1e-58 230.7 177 55.9
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 9.2e-58 227.6 228 51.8
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 2.1e-57 226.5 196 53.1
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.7e-57 226.1 208 53.4
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 6.0e-57 224.9 192 55.7
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.3e-56 223.8 227 52.9
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 1.7e-56 223.4 209 50.7
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 3.0e-56 222.6 207 52.2
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 3.0e-56 222.6 196 51.5
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.1e-56 221.9 209 50.2
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 5.1e-56 221.9 197 54.3
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 6.6e-56 221.5 208 52.9
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 6.6e-56 221.5 225 52.4
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.9e-55 219.9 223 49.8
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 9.6e-55 217.6 216 51.9
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 3.6e-54 215.7 197 51.3
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.4e-53 213.8 225 49.8
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.4e-53 213.0 198 51.0
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 8.9e-53 211.1 201 51.2
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 8.9e-53 211.1 317 39.1
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.2e-52 210.7 248 45.6
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.5e-52 210.3 166 55.4
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.4e-52 208.8 239 46.0
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 5.8e-52 208.4 195 52.3
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 7.6e-52 208.0 239 46.0
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.7e-51 206.8 236 47.5
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.9e-51 206.1 237 46.8
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 2.9e-51 206.1 235 46.8
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 3.8e-51 205.7 196 53.1
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 4.9e-51 205.3 229 48.9
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 6.4e-51 204.9 236 47.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 6.4e-51 204.9 237 47.3
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 8.4e-51 204.5 198 49.0
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.9e-50 203.4 238 48.3
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.2e-50 202.2 211 48.8
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 5.4e-50 201.8 237 47.3
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 2.1e-49 199.9 228 46.9
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.7e-49 199.5 239 44.8
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 7.8e-49 198.0 198 46.5
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.0e-48 196.1 234 44.9
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 2.8e-46 189.5 229 45.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.8e-46 189.5 172 51.2
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 8.1e-46 188.0 186 49.5
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 8.1e-46 188.0 147 60.5
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.1e-45 187.6 229 45.0
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.1e-45 187.6 186 48.4
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 4.0e-45 185.7 149 63.1
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 6.9e-45 184.9 256 43.4
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 3.5e-41 172.6 219 40.2
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.0e-40 171.0 217 41.5
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 3.1e-37 159.5 197 45.7
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 3.1e-37 159.5 193 43.5
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 9.0e-37 157.9 227 43.2
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 4.8e-30 135.6 117 52.1
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 3.4e-28 129.4 83 67.5
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.8e-24 117.1 180 41.7
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.1e-23 114.4 122 41.8
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.4e-21 107.5 119 46.2
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.4e-21 107.5 110 48.2
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.8e-21 107.1 159 40.3
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 8.5e-19 98.2 198 32.8
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.2e-17 94.4 65 64.6
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 5.1e-16 89.0 74 60.8
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.1e-15 87.8 78 53.8
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 7.4e-15 85.1 219 28.3
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 1.3e-14 84.3 191 28.8
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 3.4e-12 76.3 185 27.0
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 2.9e-11 73.2 201 26.4
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 2.5e-10 70.1 217 27.2
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 8.8e-08 61.6 207 22.7


User provided reference genes

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