Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034185 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 4.5e-08 60.8 67 100.0
CSS0005733 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 4.9e-07 57.4 24 100.0
Medtr5g030870 Medicago truncatula HOM05D007867 ORTHO05D009953 4.9e-07 57.4 24 100.0
TPR.G40500 Trifolium pratense HOM05D007867 ORTHO05D009953 4.9e-07 57.4 24 100.0
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 4.9e-07 57.4 24 100.0
Ciclev10027423m.g Citrus clementina HOM05D007867 ORTHO05D009953 1.4e-06 55.8 65 89.2
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Haze_03934 Corylus avellana HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Dinv36978 Davidia involucrata HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Glyma.09G202700 Glycine max HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Hma1.2p1_1119F.1_g259180 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Lalb_Chr16g0381471 Lupinus albus HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Psat2g134360 Pisum sativum HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 1.9e-06 55.5 24 95.8
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 2.5e-06 55.1 23 100.0
vmacro19595 Vaccinium macrocarpon HOM05D007867 ORTHO05D009953 4.2e-06 54.3 24 91.7
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 5.5e-06 53.9 24 91.7
Potri.015G025700 Populus trichocarpa HOM05D007867 ORTHO05D009953 5.5e-06 53.9 24 91.7


User provided reference genes

Program Settings