Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-25 118.6 59 100.0
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-22 109.0 66 86.4
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.8e-22 107.8 66 86.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.7e-22 107.5 65 86.2
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.3e-22 106.7 66 84.8
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-21 105.9 66 84.8
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-20 102.1 66 80.3
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 7.7e-20 99.8 66 75.8
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 7.7e-20 99.8 66 75.8
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.0e-19 99.4 64 78.1
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.0e-19 99.4 64 78.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.0e-19 99.4 64 76.6
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-19 99.0 66 78.8
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.3e-19 99.0 65 76.9
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.3e-19 99.0 65 75.4
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.3e-19 99.0 66 72.7
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.2e-19 98.2 66 74.2
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.2e-19 98.2 66 74.2
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.9e-19 97.8 66 71.2
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 2.9e-19 97.8 64 75.0
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.8e-19 97.4 64 73.4
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.5e-19 96.7 66 80.3
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 6.5e-19 96.7 65 70.8
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 6.5e-19 96.7 66 74.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 8.5e-19 96.3 66 69.7
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 8.5e-19 96.3 66 69.7
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.4e-18 95.5 63 71.4
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.4e-18 95.5 64 75.0
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.4e-18 95.5 66 72.7
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.4e-18 95.5 66 71.2
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.4e-18 95.5 65 73.8
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.4e-18 95.5 64 75.0
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.9e-18 95.1 64 73.4
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 1.9e-18 95.1 63 73.0
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 2.5e-18 94.7 64 73.4
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.5e-18 94.7 63 73.0
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 2.5e-18 94.7 64 71.9
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 3.2e-18 94.4 63 73.0
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 3.2e-18 94.4 63 73.0
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.2e-18 94.4 63 73.0
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 4.2e-18 94.0 64 73.4
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 4.2e-18 94.0 64 67.2
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.5e-18 93.6 47 95.7
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 5.5e-18 93.6 66 69.7
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 5.5e-18 93.6 48 91.7
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 9.4e-18 92.8 64 73.4
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 9.4e-18 92.8 64 68.8
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 9.4e-18 92.8 64 68.8
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 9.4e-18 92.8 64 68.8
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 9.4e-18 92.8 64 68.8
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 9.4e-18 92.8 64 73.4
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.2e-17 92.4 64 65.6
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.2e-17 92.4 64 67.2
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.2e-17 92.4 63 69.8
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.2e-17 92.4 63 71.4
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.2e-17 92.4 63 69.8
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.2e-17 92.4 63 71.4
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.6e-17 92.0 64 71.9
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.6e-17 92.0 62 74.2
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.6e-17 92.0 63 69.8
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.6e-17 92.0 63 69.8
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 2.7e-17 91.3 64 67.2
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.7e-17 91.3 66 65.2
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 2.7e-17 91.3 66 71.2
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.7e-17 91.3 62 72.6
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 2.7e-17 91.3 64 65.6
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.7e-17 91.3 64 67.2
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 2.7e-17 91.3 64 71.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 3.6e-17 90.9 62 72.6
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.6e-17 90.9 62 72.6
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.6e-17 90.9 62 72.6
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.6e-17 90.9 63 68.3
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 7.9e-17 89.7 63 69.8
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 7.9e-17 89.7 49 83.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 7.9e-17 89.7 62 72.6
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.4e-16 89.0 64 68.8
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.8e-16 88.6 64 64.1
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.8e-16 88.6 64 70.3
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.3e-16 88.2 64 64.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 3.0e-16 87.8 66 68.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 3.9e-16 87.4 63 66.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 5.1e-16 87.0 49 79.6
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 5.1e-16 87.0 49 79.6
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.7e-16 86.7 47 83.0
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 6.7e-16 86.7 64 62.5
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 8.8e-16 86.3 66 66.7
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.1e-15 85.9 64 68.8
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.1e-15 85.9 62 69.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.9e-15 85.1 47 80.9
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.5e-15 84.7 65 61.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 5.7e-15 83.6 63 68.3
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 9.7e-15 82.8 63 60.3
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.3e-14 82.4 66 62.1
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.7e-14 82.0 64 64.1
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 2.2e-14 81.6 65 67.7
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.2e-14 81.6 64 62.5
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.8e-14 81.3 63 60.3
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 6.3e-14 80.1 48 77.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.1e-13 79.3 48 77.1
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.4e-13 78.2 47 70.2
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.4e-13 78.2 65 60.0
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.3e-11 72.4 46 71.7
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.1e-10 69.3 63 52.4
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.1e-10 69.3 63 52.4
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.0e-08 61.2 45 64.4
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.9e-08 60.8 52 55.8
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 2.0e-07 58.5 53 56.6
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 2.0e-07 58.5 53 56.6
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 2.0e-07 58.5 53 56.6
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 4.4e-07 57.4 56 53.6
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 9.7e-07 56.2 51 54.9


User provided reference genes

Program Settings