Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.3e-249 865.9 420 100.0
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 6.0e-244 847.0 442 94.3
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.0e-203 713.4 441 79.6
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 3.2e-197 691.8 441 77.6
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.5e-194 682.9 440 78.4
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 9.5e-181 637.1 441 73.2
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.8e-179 632.9 447 70.9
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 8.6e-174 614.0 448 69.4
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.9e-173 612.8 440 68.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 3.3e-173 612.1 443 69.1
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.9e-171 604.0 437 67.3
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 3.4e-170 602.1 444 70.3
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.3e-169 600.1 441 67.8
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 4.9e-169 598.2 442 67.6
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 4.9e-169 598.2 445 67.6
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.3e-169 597.4 442 67.0
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.6e-167 591.7 442 66.5
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.0e-167 591.3 442 66.5
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 7.8e-167 590.9 442 66.3
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.0e-166 590.5 453 65.3
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 8.6e-166 587.4 444 67.3
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.9e-165 586.3 448 65.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 5.6e-165 584.7 449 66.1
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 9.5e-165 583.9 442 64.5
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.6e-164 583.2 434 68.4
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.6e-164 583.2 458 65.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 3.6e-164 582.0 443 65.2
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 4.7e-164 581.6 428 68.5
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 6.2e-164 581.3 442 65.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 6.2e-164 581.3 446 66.4
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 4.0e-163 578.6 441 67.6
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 5.2e-163 578.2 453 66.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 9.9e-162 573.9 442 63.3
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 2.9e-161 572.4 437 67.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.1e-160 570.5 436 67.0
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.4e-160 570.1 434 67.1
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 1.4e-160 570.1 442 63.1
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 3.2e-160 568.9 443 65.9
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 5.4e-160 568.2 459 64.3
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 3.5e-159 565.5 463 63.5
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.5e-159 565.5 445 65.2
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 5.1e-158 561.6 430 67.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.1e-158 561.6 427 66.3
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 1.5e-157 560.1 441 66.2
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.2e-156 557.0 443 64.3
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.2e-156 557.0 420 66.2
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 4.0e-155 552.0 426 66.9
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 2.6e-154 549.3 382 70.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.7e-153 546.6 436 65.1
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 2.9e-153 545.8 425 65.6
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 6.4e-153 544.7 450 63.1
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 2.1e-151 539.7 433 64.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 2.1e-151 539.7 439 62.2
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 6.0e-151 538.1 440 63.4
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.0e-150 537.3 433 64.7
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.0e-150 535.8 435 63.4
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.5e-149 533.5 453 60.9
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 3.3e-149 532.3 452 61.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 7.3e-149 531.2 452 61.9
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 7.3e-149 531.2 446 60.1
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 3.6e-148 528.9 472 59.1
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 4.7e-148 528.5 448 60.9
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.4e-147 526.9 403 66.0
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.4e-147 526.9 428 63.6
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.4e-147 526.9 445 60.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.4e-147 526.9 436 61.0
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.4e-147 526.2 428 63.1
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.4e-147 526.2 434 64.1
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 5.2e-147 525.0 448 60.5
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.2e-145 519.6 423 63.1
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 6.4e-145 518.1 428 61.2
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 3.2e-144 515.8 431 60.6
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 4.2e-144 515.4 445 60.9
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.7e-143 512.7 302 79.8
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 3.5e-143 512.3 434 61.5
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.3e-142 509.6 425 62.1
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.5e-141 506.9 386 67.4
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.9e-141 506.5 417 61.4
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 7.3e-141 504.6 467 57.6
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.6e-140 503.4 473 57.9
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 3.6e-140 502.3 430 61.6
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.0e-138 496.5 430 60.7
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 1.1e-136 490.7 333 70.3
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.9e-136 490.0 438 58.9
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.2e-136 489.2 401 59.6
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 4.6e-135 485.3 507 51.3
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 5.1e-134 481.9 448 59.2
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.9e-133 479.9 301 71.1
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.3e-133 478.8 370 66.5
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 2.6e-122 443.0 293 71.0
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 2.5e-120 436.4 446 55.2
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.6e-111 407.1 232 81.9
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 2.7e-111 406.4 347 63.7
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.7e-111 406.4 328 60.7
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.7e-111 406.4 328 60.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 4.6e-111 405.6 424 50.5
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.7e-108 397.1 398 53.8
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 2.2e-108 396.7 266 69.9
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-107 394.4 339 60.2
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.0e-106 390.2 298 63.4
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.0e-105 387.9 301 62.1
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.8e-105 386.0 218 81.2
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 3.2e-104 382.9 355 59.2
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 5.7e-101 372.1 307 59.3
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.2e-98 364.4 344 56.4
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.2e-87 327.8 201 78.1
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 5.9e-74 282.3 208 63.5
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 5.9e-74 282.3 208 63.5
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.3e-73 281.2 202 69.3
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 3.6e-71 273.1 267 49.4
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.1e-64 251.5 278 41.4
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 5.4e-59 232.6 118 86.4
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 7.0e-51 205.7 255 47.1
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 3.9e-49 199.9 196 51.0
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.1e-39 167.5 134 59.0
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 2.7e-34 150.6 155 49.7
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.1e-31 141.0 70 90.0
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 6.9e-30 136.0 80 73.8
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.7e-26 124.0 101 55.4
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.3e-23 115.2 68 75.0
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 2.6e-21 107.5 76 63.2
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.5e-16 90.9 53 75.5
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.7e-12 78.2 64 54.7
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.5e-11 74.3 120 31.7
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 9.3e-11 72.4 110 45.5
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.1e-10 71.2 94 52.1
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.5e-08 64.3 59 45.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 9.6e-08 62.4 39 66.7


User provided reference genes

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