Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 2.4e-79 298.9 165 100.0
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 5.8e-41 171.4 171 66.1
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 5.8e-41 171.4 171 66.1
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 5.8e-41 171.4 171 66.1
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 3.6e-35 152.1 172 57.0
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 8.9e-34 147.5 173 62.4
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 4.4e-33 145.2 161 58.4
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 8.4e-32 141.0 168 54.2
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.2e-31 139.0 171 48.5
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.6e-30 136.7 171 48.0
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 2.1e-30 136.3 135 59.3
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 6.0e-30 134.8 173 59.0
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 7.8e-30 134.4 163 55.8
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.0e-29 134.0 159 51.6
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 1.3e-29 133.7 163 55.8
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 5.1e-29 131.7 167 54.5
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.1e-28 130.6 168 52.4
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 4.3e-28 128.6 168 53.0
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.6e-27 126.7 176 47.7
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.6e-27 126.7 108 65.7
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 6.2e-27 124.8 162 49.4
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.4e-26 123.6 176 47.2
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 2.0e-25 119.8 170 50.6
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.4e-25 119.0 182 50.0
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 3.4e-25 119.0 167 52.1
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 5.8e-25 118.2 134 50.0
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 7.6e-25 117.9 177 46.3
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 7.6e-25 117.9 168 51.2
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 1.3e-24 117.1 115 59.1
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 2.2e-24 116.3 167 51.5
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.8e-24 115.5 119 61.3
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 3.8e-24 115.5 167 46.1
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 4.9e-24 115.2 172 49.4
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 8.4e-24 114.4 163 50.3
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 8.4e-24 114.4 167 46.1
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.4e-23 113.6 172 45.3
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.4e-23 113.6 172 45.3
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.9e-23 113.2 167 46.1
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 2.4e-23 112.8 173 50.3
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 3.2e-23 112.5 179 49.2
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 4.2e-23 112.1 174 50.0
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 7.1e-23 111.3 113 55.8
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 7.1e-23 111.3 149 49.0
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.2e-22 110.5 172 45.3
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.2e-22 110.5 122 58.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 1.2e-22 110.5 176 49.4
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 3.5e-22 109.0 165 48.5
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.5e-22 109.0 165 47.9
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 4.6e-22 108.6 165 44.2
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 6.0e-22 108.2 164 47.6
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 6.0e-22 108.2 172 43.6
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.0e-22 108.2 108 58.3
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 7.9e-22 107.8 174 47.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 7.9e-22 107.8 172 45.3
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.0e-21 107.5 169 47.3
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.0e-21 107.5 115 58.3
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 3.9e-21 105.5 141 49.6
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 5.1e-21 105.1 113 55.8
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 5.1e-21 105.1 165 48.5
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 6.7e-21 104.8 174 44.8
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 6.7e-21 104.8 141 50.4
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 6.7e-21 104.8 168 48.8
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.1e-20 104.0 175 49.7
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 1.5e-20 103.6 109 57.8
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.9e-20 103.2 170 42.9
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 3.3e-20 102.4 131 49.6
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 4.3e-20 102.1 119 53.8
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 5.6e-20 101.7 171 48.5
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 5.6e-20 101.7 162 47.5
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 7.4e-20 101.3 175 42.9
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 9.6e-20 100.9 165 48.5
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.6e-19 100.1 173 48.0
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.1e-19 99.8 166 48.8
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 8.1e-19 97.8 172 46.5
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.1e-18 97.4 166 44.6
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.1e-18 97.4 166 44.6
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.4e-18 97.1 159 42.8
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 3.1e-18 95.9 165 44.8
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 5.3e-18 95.1 136 51.5
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.2e-17 94.0 184 40.8
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 1.5e-17 93.6 164 46.3
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 3.4e-17 92.4 116 56.0
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 4.5e-17 92.0 71 67.6
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 7.6e-17 91.3 153 44.4
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 9.9e-17 90.9 74 67.6
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.3e-16 90.5 171 41.5
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.3e-16 90.5 110 50.0
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 2.2e-16 89.7 100 57.0
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.9e-16 89.4 74 66.2
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 4.9e-16 88.6 104 56.7
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 4.9e-16 88.6 115 48.7
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 6.4e-16 88.2 182 44.5
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 8.4e-16 87.8 194 39.2
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.4e-15 87.0 167 41.3
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 4.2e-15 85.5 169 44.4
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 1.6e-14 83.6 172 44.2
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.0e-13 80.9 163 41.1
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 6.7e-13 78.2 171 36.8
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 9.6e-12 74.3 142 37.3
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 2.8e-11 72.8 175 40.0
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.7e-11 72.4 150 35.3
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.4e-10 70.5 81 49.4
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 2.6e-09 66.2 171 42.1
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 1.4e-07 60.5 77 40.3
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 2.7e-06 56.2 50 52.0
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 2.7e-06 56.2 50 52.0
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 2.7e-06 56.2 50 52.0


User provided reference genes

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