Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034103 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 0.0e+00 2372.4 1222 100.0
Actinidia06806 Actinidia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1854.3 1222 78.7
CSS0006494 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 0.0e+00 1780.4 965 95.1
CSS0002264 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 0.0e+00 1729.1 965 92.7
TAR626G1158 Trochodendron aralioides HOM05D007170 ORTHO05D009243 0.0e+00 1639.0 1223 69.3
GSVIVG01020797001 Vitis vinifera HOM05D007170 ORTHO05D009243 0.0e+00 1572.4 1221 67.7
Cfa020492 Carpinus fangiana HOM05D007170 ORTHO05D009243 0.0e+00 1543.5 1224 67.7
RcHm_v2.0_Chr2g0154431 Rosa chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1530.4 1222 65.5
Potri.006G023500 Populus trichocarpa HOM05D007170 ORTHO05D009243 0.0e+00 1528.1 1225 66.7
Prupe.3G191100 Prunus persica HOM05D007170 ORTHO05D009243 0.0e+00 1526.1 1200 66.1
MD09G1135500 Malus domestica HOM05D007170 ORTHO05D009243 0.0e+00 1525.8 1231 65.2
Sabra06G0017000 Salix brachista HOM05D007170 ORTHO05D009243 0.0e+00 1525.8 1225 66.5
Atru.chr8.950 Acer truncatum HOM05D007170 ORTHO05D009243 0.0e+00 1512.7 1225 66.1
Nn3g20634 Nelumbo nucifera HOM05D007170 ORTHO05D009243 0.0e+00 1506.1 1192 66.7
Haze_09546 Corylus avellana HOM05D007170 ORTHO05D009243 0.0e+00 1498.8 1270 64.5
FvH4_6g39900 Fragaria vesca HOM05D007170 ORTHO05D009243 0.0e+00 1497.6 1222 64.0
Duzib138G0290 Durio zibethinus HOM05D007170 ORTHO05D009243 0.0e+00 1463.4 1219 64.3
FAN02G4004 Fragaria x ananassa HOM05D007170 ORTHO05D009243 0.0e+00 1458.0 1225 63.3
CANSAT64G1590 Cannabis sativa HOM05D007170 ORTHO05D009243 0.0e+00 1454.1 1224 64.1
CiPaw.03G198500 Carya illinoinensis HOM05D007170 ORTHO05D009243 0.0e+00 1450.3 1225 64.7
Thecc.01G177100 Theobroma cacao HOM05D007170 ORTHO05D009243 0.0e+00 1444.9 1203 64.1
FAN14G4936 Fragaria x ananassa HOM05D007170 ORTHO05D009243 0.0e+00 1439.5 1240 62.1
Aqoxy3G00362 Aquilegia oxysepala HOM05D007170 ORTHO05D009243 0.0e+00 1425.6 1235 62.6
DCAR_006644 Daucus carota HOM05D007170 ORTHO05D009243 0.0e+00 1411.4 1233 61.2
MBI02_g15149_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 0.0e+00 1407.1 1272 60.2
Manes.09G075018 Manihot esculenta HOM05D007170 ORTHO05D009243 0.0e+00 1399.8 1239 60.7
Cc02_g31000 Coffea canephora HOM05D007170 ORTHO05D009243 0.0e+00 1396.7 1212 62.0
Gohir.D07G192100 Gossypium hirsutum HOM05D007170 ORTHO05D009243 0.0e+00 1391.3 1227 61.8
Gorai.001G214900 Gossypium raimondii HOM05D007170 ORTHO05D009243 0.0e+00 1384.8 1227 61.8
Ciclev10010909m.g Citrus clementina HOM05D007170 ORTHO05D009243 0.0e+00 1378.2 1131 65.0
Nitab4.5_0002247g0080 Nicotiana tabacum HOM05D007170 ORTHO05D009243 0.0e+00 1357.8 1241 59.9
Peaxi162Scf00647g00012 Petunia axillaris HOM05D007170 ORTHO05D009243 0.0e+00 1352.8 1264 59.1
PSO541G2476 Papaver somniferum HOM05D007170 ORTHO05D009243 0.0e+00 1347.4 1228 59.1
HanXRQChr10g0314771 Helianthus annuus HOM05D007170 ORTHO05D009243 0.0e+00 1345.1 1214 59.8
PSO675G2674 Papaver somniferum HOM05D007170 ORTHO05D009243 0.0e+00 1343.2 1233 59.1
Sopen01g040790 Solanum pennellii HOM05D007170 ORTHO05D009243 0.0e+00 1339.7 1217 59.2
Solyc01g097110.2 Solanum lycopersicum HOM05D007170 ORTHO05D009243 0.0e+00 1338.9 1218 59.4
Sc07g0002130 Simmondsia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1337.4 1172 60.7
PGR031G3275 Punica granatum HOM05D007170 ORTHO05D009243 0.0e+00 1327.4 1225 59.3
Eucgr.A00891 Eucalyptus grandis HOM05D007170 ORTHO05D009243 0.0e+00 1313.5 1228 58.9
Lsat_1_v5_gn_2_66140 Lactuca sativa HOM05D007170 ORTHO05D009243 0.0e+00 1292.3 1232 58.3
Nitab4.5_0005905g0020 Nicotiana tabacum HOM05D007170 ORTHO05D009243 0.0e+00 1291.6 1247 57.7
Lj7A482G28 Lonicera japonica HOM05D007170 ORTHO05D009243 0.0e+00 1280.8 1071 64.5
BcaB04g18275 Brassica carinata HOM05D007170 ORTHO05D009243 0.0e+00 1280.0 1204 58.1
AL7G40850 Arabidopsis lyrata HOM05D007170 ORTHO05D009243 0.0e+00 1271.9 1222 57.9
A08p11580 Brassica napus HOM05D007170 ORTHO05D009243 0.0e+00 1264.6 1205 57.4
SalBow8G4071 Salvia bowleyana HOM05D007170 ORTHO05D009243 0.0e+00 1263.1 1287 54.5
BraA08t33150Z Brassica rapa HOM05D007170 ORTHO05D009243 0.0e+00 1261.9 1205 57.5
AT4G14970 Arabidopsis thaliana HOM05D007170 ORTHO05D009243 0.0e+00 1256.5 1216 57.5
BolC8t48255H Brassica oleracea HOM05D007170 ORTHO05D009243 0.0e+00 1254.2 1219 56.4
Oeu038464.1 Olea europaea HOM05D007170 ORTHO05D009243 0.0e+00 1248.4 1277 55.2
BcaC07g37864 Brassica carinata HOM05D007170 ORTHO05D009243 0.0e+00 1246.5 1203 56.7
ATR1098G002 Amborella trichopoda HOM05D007170 ORTHO05D009243 0.0e+00 1243.8 1205 55.5
ECA238G4341 Erigeron canadensis HOM05D007170 ORTHO05D009243 0.0e+00 1239.9 1217 57.1
SGA_v2.0_scaffold172G38980 Striga asiatica HOM05D007170 ORTHO05D009243 0.0e+00 1238.0 1307 53.0
Thhalv10024215m.g Eutrema salsugineum HOM05D007170 ORTHO05D009243 0.0e+00 1216.4 1221 55.8
SEGI_23823 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 1.7e-307 1059.7 1214 48.8
Cpa.g.sc8.299 Carica papaya HOM05D007170 ORTHO05D009243 5.5e-306 1054.7 1233 51.4
Gohir.A07G185500 Gossypium hirsutum HOM05D007170 ORTHO05D009243 3.7e-294 1015.4 940 59.7
Migut.B01114 Erythranthe guttata HOM05D007170 ORTHO05D009243 2.3e-272 943.0 955 54.6
Zm00001eb117500 Zea mays HOM05D007170 ORTHO05D009243 5.4e-269 931.8 1023 51.1
Dinv20276 Davidia involucrata HOM05D007170 ORTHO05D009243 6.4e-254 881.7 647 73.7
Mapoly0001s0378 Marchantia polymorpha HOM05D007170 ORTHO05D009243 9.3e-245 851.3 1251 40.7
Pp3c3_20180 Physcomitrium patens HOM05D007170 ORTHO05D009243 8.2e-233 811.6 1218 39.2
Dinv20277 Davidia involucrata HOM05D007170 ORTHO05D009243 2.5e-229 800.0 524 78.8
Os07g0154400 Oryza sativa ssp. japonica HOM05D007170 ORTHO05D009243 8.5e-222 775.0 820 53.3
AagrBONN_evm.TU.Sc2ySwM_344.1322 Anthoceros agrestis HOM05D007170 ORTHO05D009243 6.1e-212 742.3 1220 38.4
HPP92_019551 Vanilla planifolia HOM05D007170 ORTHO05D009243 4.1e-176 623.2 733 48.2
CAN.G134.69 Capsicum annuum HOM05D007170 ORTHO05D009243 8.1e-140 502.7 703 45.7
Hma1.2p1_0892F.1_g233440 Hydrangea macrophylla HOM05D007170 ORTHO05D009243 2.6e-138 497.7 313 81.8
HPP92_019550 Vanilla planifolia HOM05D007170 ORTHO05D009243 3.7e-132 477.2 438 57.3
CBR_g3147 Chara braunii HOM05D007170 ORTHO05D009243 3.9e-126 457.2 725 37.5
CAN.G134.71 Capsicum annuum HOM05D007170 ORTHO05D009243 1.8e-110 405.2 304 68.8
Dinv20273 Davidia involucrata HOM05D007170 ORTHO05D009243 4.7e-87 327.4 430 46.7
CARHR221630 Cardamine hirsuta HOM05D007170 ORTHO05D009243 7.5e-85 320.1 255 64.7
Gohir.A07G185533 Gossypium hirsutum HOM05D007170 ORTHO05D009243 2.6e-77 295.0 230 68.3
CARHR221660 Cardamine hirsuta HOM05D007170 ORTHO05D009243 1.2e-69 269.6 321 50.2
CARHR221670 Cardamine hirsuta HOM05D007170 ORTHO05D009243 1.3e-65 256.1 194 68.6
COL.COLO4_06563 Corchorus olitorius HOM05D007170 ORTHO05D009243 3.1e-46 191.8 147 72.1
CBR_g54165 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-46 190.3 231 40.7
QL08p022040 Quercus lobata HOM05D007170 ORTHO05D009243 1.3e-44 186.4 205 52.7
Zm00001eb046090 Zea mays HOM05D007170 ORTHO05D009243 1.2e-42 179.9 208 45.7
CARHR221640 Cardamine hirsuta HOM05D007170 ORTHO05D009243 6.6e-41 174.1 143 62.2
Cpa.g.sc8.300 Carica papaya HOM05D007170 ORTHO05D009243 3.3e-40 171.8 138 65.9
Dinv20272 Davidia involucrata HOM05D007170 ORTHO05D009243 5.6e-32 144.4 113 71.7
Zm00001eb010760 Zea mays HOM05D007170 ORTHO05D009243 9.3e-27 127.1 112 53.6
Zm00001eb442000 Zea mays HOM05D007170 ORTHO05D009243 9.3e-27 127.1 112 53.6
Zm00001eb031530 Zea mays HOM05D007170 ORTHO05D009243 2.3e-25 122.5 112 51.8
CARHR221650 Cardamine hirsuta HOM05D007170 ORTHO05D009243 5.3e-22 111.3 198 38.9
COL.COLO4_06564 Corchorus olitorius HOM05D007170 ORTHO05D009243 1.1e-19 103.6 134 49.3
QL02p039588 Quercus lobata HOM05D007170 ORTHO05D009243 2.4e-19 102.4 136 47.8
CDE07G1841 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 3.2e-19 102.1 301 27.6
Carub.0007s2712 Capsella rubella HOM05D007170 ORTHO05D009243 3.3e-16 92.0 69 66.7
GSVIVG01038387001 Vitis vinifera HOM05D007170 ORTHO05D009243 2.8e-15 89.0 51 84.3
Zm00001eb008220 Zea mays HOM05D007170 ORTHO05D009243 1.8e-14 86.3 120 37.5
Lj7A482T28 Lonicera japonica HOM05D007170 ORTHO05D009243 2.0e-13 82.8 121 47.9
GSVIVG01038403001 Vitis vinifera HOM05D007170 ORTHO05D009243 7.1e-11 74.3 40 87.5
CDE07G1176 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 5.1e-09 68.2 69 52.2
Zm00001eb019760 Zea mays HOM05D007170 ORTHO05D009243 1.6e-07 63.2 115 33.0
C03p18330 Brassica napus HOM05D007170 ORTHO05D041508 1.1e-06 60.5 35 77.1


User provided reference genes

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