Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.7e-241 837.4 417 100.0
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.5e-181 637.9 415 77.1
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 6.7e-179 630.9 413 78.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.1e-172 609.4 412 74.8
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 4.8e-169 598.2 417 76.0
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 2.4e-168 595.9 416 75.0
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 2.4e-168 595.9 416 74.5
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.5e-165 586.6 393 74.0
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 9.5e-165 583.9 424 72.2
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.6e-164 583.2 418 70.1
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 8.0e-164 580.9 413 72.9
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 8.8e-163 577.4 411 69.3
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 9.8e-162 573.9 413 70.5
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.7e-161 573.2 416 71.4
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.2e-161 572.8 414 70.0
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.8e-161 572.4 414 70.8
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.4e-160 570.1 394 73.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 3.1e-160 568.9 414 70.3
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 3.5e-159 565.5 411 71.5
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.5e-159 565.5 411 71.5
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.0e-158 563.9 378 73.0
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.3e-158 563.5 408 71.1
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.3e-158 562.8 309 88.3
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 2.3e-158 562.8 383 71.8
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 6.6e-158 561.2 415 68.2
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.9e-157 559.7 415 69.9
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 3.3e-157 558.9 411 70.3
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 4.3e-157 558.5 345 78.3
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 5.6e-157 558.1 380 73.7
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 7.3e-157 557.8 416 68.3
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.2e-156 557.0 415 67.2
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.6e-156 556.6 409 68.7
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 2.1e-156 556.2 413 69.0
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 2.1e-156 556.2 419 67.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 2.8e-156 555.8 416 68.0
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 3.6e-156 555.4 385 71.9
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 3.6e-156 555.4 359 75.8
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 4.7e-156 555.1 415 67.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 8.0e-156 554.3 423 68.1
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.0e-155 553.9 420 68.8
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 5.2e-155 551.6 396 71.2
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 6.8e-155 551.2 346 76.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.5e-154 550.1 394 70.6
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.6e-154 549.3 415 67.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.6e-154 549.3 380 70.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 2.6e-154 549.3 413 66.1
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.4e-154 548.5 397 71.0
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 7.5e-154 547.7 413 67.8
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 6.4e-153 544.7 413 66.8
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 6.4e-153 544.7 413 67.8
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 8.3e-153 544.3 413 66.8
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.1e-152 543.9 394 70.1
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 3.2e-152 542.3 415 67.2
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 4.1e-152 542.0 386 69.9
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.6e-151 540.0 415 68.7
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 2.7e-151 539.3 413 67.8
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.5e-151 538.9 340 76.5
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 7.8e-151 537.7 432 65.0
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 1.0e-150 537.3 399 67.9
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 3.0e-150 535.8 413 68.3
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 3.0e-150 535.8 379 71.5
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.0e-150 535.0 413 65.6
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 5.0e-150 535.0 358 72.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.2e-148 530.4 317 78.9
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.1e-148 529.6 416 63.2
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 3.6e-148 528.9 392 68.1
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 4.7e-148 528.5 392 67.9
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 8.0e-148 527.7 398 68.3
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 2.6e-146 522.7 430 63.5
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 5.8e-146 521.5 318 78.6
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 9.8e-146 520.8 347 72.9
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.7e-145 520.0 397 66.0
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 4.9e-145 518.5 411 64.5
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 4.9e-145 518.5 411 64.5
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 8.3e-145 517.7 407 64.6
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.1e-144 517.3 382 67.5
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 4.1e-144 515.4 412 63.1
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.6e-143 513.5 361 69.3
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 3.5e-143 512.3 346 71.1
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 7.8e-143 511.1 413 63.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 3.0e-142 509.2 387 66.1
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 3.9e-142 508.8 355 69.9
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 8.6e-142 507.7 376 67.6
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 8.6e-142 507.7 376 67.6
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 1.1e-141 507.3 443 60.9
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 5.6e-141 505.0 318 75.5
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.5e-141 504.2 359 68.8
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 4.7e-140 501.9 379 67.8
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 5.6e-133 478.4 318 77.7
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 7.3e-133 478.0 359 64.9
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 9.5e-133 477.6 322 73.9
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 4.0e-131 472.2 345 67.5
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 4.4e-130 468.8 295 77.3
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 1.1e-128 464.2 397 62.2
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 3.2e-128 462.6 386 61.9
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 3.8e-121 439.1 366 60.9
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.3e-118 430.6 247 82.2
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 6.0e-111 405.2 255 74.9
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.8e-110 403.7 247 78.1
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.9e-110 402.5 359 63.0
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 8.1e-108 394.8 346 55.8
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.7e-102 374.8 302 66.2
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.1e-101 374.4 325 62.2
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 8.4e-97 358.2 383 53.3
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 9.3e-96 354.8 208 82.7
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.1e-88 331.3 363 45.2
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 2.8e-84 316.6 335 46.6
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 3.9e-70 269.6 380 38.2
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.1e-67 260.0 184 66.8
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 1.3e-44 184.9 126 67.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 5.9e-42 176.0 229 43.2
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-41 175.3 159 56.6
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 6.6e-41 172.6 149 58.4
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.0e-38 163.3 91 83.5
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 3.4e-37 160.2 100 76.0
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.5e-29 134.8 112 62.5
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 8.1e-23 112.5 88 60.2
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.5e-16 90.9 53 73.6
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 4.7e-15 86.7 93 51.6
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 1.7e-09 68.2 110 46.4


User provided reference genes

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