Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 8.3e-56 219.9 96 100.0
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.3e-53 212.6 104 92.3
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.3e-32 142.9 76 81.6
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 6.4e-32 140.6 76 80.3
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.2e-30 136.3 81 77.8
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 7.8e-30 133.7 76 78.9
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.0e-29 133.3 84 71.4
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 2.3e-29 132.1 76 75.0
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.0e-29 131.7 76 75.0
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 3.0e-29 131.7 76 75.0
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 3.9e-29 131.3 76 75.0
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 6.6e-29 130.6 87 67.8
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 8.6e-29 130.2 76 75.0
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 8.6e-29 130.2 76 75.0
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 4.3e-28 127.9 81 70.4
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 4.3e-28 127.9 82 69.5
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 4.3e-28 127.9 76 73.7
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 7.3e-28 127.1 81 74.1
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 9.5e-28 126.7 76 71.1
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.2e-27 126.3 76 71.1
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.2e-27 126.3 76 75.0
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.6e-27 125.9 81 72.8
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 2.1e-27 125.6 76 75.0
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 2.1e-27 125.6 76 73.7
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 2.8e-27 125.2 76 72.4
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 6.2e-27 124.0 76 73.7
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 6.2e-27 124.0 79 65.8
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.4e-26 122.9 76 72.4
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.8e-26 122.5 81 66.7
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 2.3e-26 122.1 76 71.1
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 3.1e-26 121.7 76 72.4
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 4.0e-26 121.3 81 69.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 5.2e-26 120.9 76 71.1
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 5.2e-26 120.9 76 72.4
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 6.8e-26 120.6 81 65.4
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 8.9e-26 120.2 84 64.3
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.5e-25 119.4 76 68.4
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 1.5e-25 119.4 81 65.4
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 2.0e-25 119.0 76 71.1
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 2.0e-25 119.0 76 69.7
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.0e-25 119.0 76 69.7
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 2.0e-25 119.0 78 69.2
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 2.0e-25 119.0 76 71.1
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 2.6e-25 118.6 76 68.4
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.4e-25 118.2 92 59.8
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 3.4e-25 118.2 76 72.4
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 4.4e-25 117.9 76 68.4
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 4.4e-25 117.9 76 67.1
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 5.8e-25 117.5 76 69.7
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 5.8e-25 117.5 81 69.1
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 5.8e-25 117.5 81 67.9
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 5.8e-25 117.5 76 68.4
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 7.5e-25 117.1 76 68.4
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 9.8e-25 116.7 81 64.2
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 9.8e-25 116.7 76 64.5
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 9.8e-25 116.7 76 68.4
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.3e-24 116.3 76 69.7
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.3e-24 116.3 76 71.1
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.3e-24 116.3 76 71.1
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.3e-24 116.3 76 64.5
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 1.7e-24 115.9 76 67.1
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 2.2e-24 115.5 76 69.7
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 4.9e-24 114.4 81 66.7
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 6.4e-24 114.0 76 68.4
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 8.3e-24 113.6 76 68.4
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 8.3e-24 113.6 76 68.4
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.1e-23 113.2 81 64.2
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 1.1e-23 113.2 76 72.4
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.4e-23 112.8 76 67.1
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.4e-23 112.8 76 67.1
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.4e-23 112.8 76 67.1
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 1.4e-23 112.8 76 67.1
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 1.4e-23 112.8 76 67.1
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 2.4e-23 112.1 76 59.2
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 2.4e-23 112.1 81 65.4
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 3.2e-23 111.7 76 68.4
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 4.1e-23 111.3 76 67.1
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 4.1e-23 111.3 76 65.8
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 5.4e-23 110.9 76 67.1
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 5.4e-23 110.9 76 68.4
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 5.4e-23 110.9 76 64.5
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 7.1e-23 110.5 76 65.8
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 7.1e-23 110.5 76 65.8
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 7.1e-23 110.5 76 65.8
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 7.1e-23 110.5 76 68.4
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 7.1e-23 110.5 81 64.2
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 1.2e-22 109.8 77 63.6
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 1.2e-22 109.8 76 67.1
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 2.7e-22 108.6 76 67.1
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 1.0e-21 106.7 81 66.7
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.3e-21 106.3 81 60.5
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 3.9e-21 104.8 81 61.7
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 5.1e-21 104.4 76 63.2
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.2e-17 93.2 82 56.1
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 1.7e-16 89.4 84 53.6
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 4.9e-16 87.8 81 51.9
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 4.9e-16 87.8 82 53.7
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 1.9e-15 85.9 50 76.0
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 1.9e-15 85.9 76 56.6
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 3.9e-13 78.2 84 50.0
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 1.5e-12 76.3 54 61.1
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.9e-12 75.9 81 45.7
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 4.7e-11 71.2 88 43.2
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 8.9e-10 67.0 92 46.7
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 8.9e-10 67.0 92 46.7


User provided reference genes

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