Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033970 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 1.9e-36 155.2 72 100.0
CSS0029949 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 1.5e-33 145.6 69 95.7
SalBow8G2261 Salvia bowleyana HOM05D004878 ORTHO05D006497 7.1e-28 126.7 67 83.6
SalBow8G2923 Salvia bowleyana HOM05D004878 ORTHO05D006497 7.1e-28 126.7 67 83.6
Cc09_g06230 Coffea canephora HOM05D004878 ORTHO05D006497 2.1e-27 125.2 67 83.6
Migut.M01973 Erythranthe guttata HOM05D004878 ORTHO05D006497 6.0e-27 123.6 67 82.1
Actinidia33655 Actinidia chinensis HOM05D004878 ORTHO05D006497 1.0e-26 122.9 67 83.6
DCAR_003786 Daucus carota HOM05D004878 ORTHO05D006497 1.3e-26 122.5 67 80.6
GSVIVG01012083001 Vitis vinifera HOM05D004878 ORTHO05D006497 1.8e-26 122.1 67 80.6
Nitab4.5_0002056g0080 Nicotiana tabacum HOM05D004878 ORTHO05D006497 3.0e-26 121.3 67 79.1
MSTRG.16341 Avicennia marina HOM05D004878 ORTHO05D006497 3.9e-26 120.9 67 79.1
Lj1A1144T48 Lonicera japonica HOM05D004878 ORTHO05D006497 3.9e-26 120.9 67 77.6
CAN.G519.8 Capsicum annuum HOM05D004878 ORTHO05D006497 5.1e-26 120.6 67 77.6
Nitab4.5_0003773g0010 Nicotiana tabacum HOM05D004878 ORTHO05D006497 5.1e-26 120.6 67 79.1
Solyc02g069010.4 Solanum lycopersicum HOM05D004878 ORTHO05D006497 8.7e-26 119.8 67 77.6
Sopen02g018080 Solanum pennellii HOM05D004878 ORTHO05D006497 8.7e-26 119.8 67 77.6
TPR.G9524 Trifolium pratense HOM05D004878 ORTHO05D006497 1.9e-25 118.6 67 79.1
HanXRQChr12g0378221 Helianthus annuus HOM05D004878 ORTHO05D006497 2.5e-25 118.2 67 76.1
MD10G1234100 Malus domestica HOM05D004878 ORTHO05D006497 2.5e-25 118.2 67 79.1
CsaV3_1G017150 Cucumis sativus L. HOM05D004878 ORTHO05D006497 3.3e-25 117.9 67 77.6
PSO675G2265 Papaver somniferum HOM05D004878 ORTHO05D006497 3.3e-25 117.9 67 76.1
Cfa000720 Carpinus fangiana HOM05D004878 ORTHO05D006497 4.3e-25 117.5 65 80.0
FAN16G2586 Fragaria x ananassa HOM05D004878 ORTHO05D006497 5.7e-25 117.1 67 77.6
PSO675G3235 Papaver somniferum HOM05D004878 ORTHO05D006497 5.7e-25 117.1 67 76.1
vmacro03511 Vaccinium macrocarpon HOM05D004878 ORTHO05D006497 5.7e-25 117.1 67 79.1
HPP92_028557 Vanilla planifolia HOM05D004878 ORTHO05D006497 5.7e-25 117.1 67 77.6
FvH4_3g12170 Fragaria vesca HOM05D004878 ORTHO05D006497 7.4e-25 116.7 67 76.1
TAR624G0003 Trochodendron aralioides HOM05D004878 ORTHO05D006497 7.4e-25 116.7 67 76.1
AL1G49290 Arabidopsis lyrata HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
AT1G31190 Arabidopsis thaliana HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
Carub.0001s2959 Capsella rubella HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 76.1
Cpa.g.sc135.22 Carica papaya HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
CiPaw.09G078300 Carya illinoinensis HOM05D004878 ORTHO05D006497 1.6e-24 115.5 65 78.5
ClCG01G010320 Citrullus lanatus HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
Thhalv10007962m.g Eutrema salsugineum HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
Thhalv10009483m.g Eutrema salsugineum HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
MBI01_g44876_MAGBIO Magnolia biondii HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 77.6
Potri.012G120492 Populus trichocarpa HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 79.1
Potri.015G120400 Populus trichocarpa HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 79.1
Rhsim13G0131200 Rhododendron simsii HOM05D004878 ORTHO05D006497 1.6e-24 115.5 67 79.1
THA.LOC104798550 Tarenaya hassleriana HOM05D004878 ORTHO05D006497 2.1e-24 115.2 67 76.1
arahy.Tifrunner.gnm1.ann1.6I23D0 Arachis hypogaea HOM05D004878 ORTHO05D006497 2.8e-24 114.8 67 77.6
arahy.Tifrunner.gnm1.ann1.RY21T0 Arachis hypogaea HOM05D004878 ORTHO05D006497 2.8e-24 114.8 67 77.6
Ciclev10015670m.g Citrus clementina HOM05D004878 ORTHO05D006497 2.8e-24 114.8 67 76.1
Peaxi162Scf00149g00811 Petunia axillaris HOM05D004878 ORTHO05D006497 2.8e-24 114.8 67 74.6
Phvul.009G205700 Phaseolus vulgaris HOM05D004878 ORTHO05D006497 2.8e-24 114.8 67 77.6
Sp1g27010 Schrenkiella parvula HOM05D004878 ORTHO05D006497 2.8e-24 114.8 67 77.6
Glyma.06G218300 Glycine max HOM05D004878 ORTHO05D006497 3.7e-24 114.4 67 77.6
Sed0019791 Sechium edule HOM05D004878 ORTHO05D006497 3.7e-24 114.4 67 76.1
BcaB07g32781 Brassica carinata HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
BcaC05g27149 Brassica carinata HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
A09p35050 Brassica napus HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
C05p30360 Brassica napus HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
BolC5t31775H Brassica oleracea HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
BraA09t39036Z Brassica rapa HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
CANSAT35G1110 Cannabis sativa HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 74.6
MD05G1253100 Malus domestica HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
Thecc.06G141500 Theobroma cacao HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 77.6
VMungo1309G2006 Vigna mungo HOM05D004878 ORTHO05D006497 6.2e-24 113.6 67 76.1
Atru.chr10.492 Acer truncatum HOM05D004878 ORTHO05D006497 1.1e-23 112.8 67 76.1
ATR0763G188 Amborella trichopoda HOM05D004878 ORTHO05D006497 1.1e-23 112.8 67 74.6
unitig_27.g24819 Utricularia gibba HOM05D004878 ORTHO05D006497 1.1e-23 112.8 66 80.3
Aqoxy3G04145 Aquilegia oxysepala HOM05D004878 ORTHO05D006497 1.8e-23 112.1 67 73.1
EL10Ac5g11219 Beta vulgaris HOM05D004878 ORTHO05D006497 1.8e-23 112.1 67 71.6
CARHR030660 Cardamine hirsuta HOM05D004878 ORTHO05D006497 1.8e-23 112.1 67 74.6
QL11p017966 Quercus lobata HOM05D004878 ORTHO05D006497 1.8e-23 112.1 65 75.4
TWI63G1027 Tripterygium wilfordii HOM05D004878 ORTHO05D006497 2.4e-23 111.7 67 74.6
Duzib235G0192 Durio zibethinus HOM05D004878 ORTHO05D006497 3.1e-23 111.3 67 76.1
Lsat_1_v5_gn_5_36260 Lactuca sativa HOM05D004878 ORTHO05D006497 3.1e-23 111.3 65 73.8
Os02g0169900 Oryza sativa ssp. japonica HOM05D004878 ORTHO05D006497 3.1e-23 111.3 67 74.6
RcHm_v2.0_Chr5g0019961 Rosa chinensis HOM05D004878 ORTHO05D006497 4.0e-23 110.9 67 74.6
Manes.16G059325 Manihot esculenta HOM05D004878 ORTHO05D006497 5.3e-23 110.5 67 74.6
Psat1g023920 Pisum sativum HOM05D004878 ORTHO05D006497 5.3e-23 110.5 67 74.6
Zm00001eb207300 Zea mays HOM05D004878 ORTHO05D006497 5.3e-23 110.5 67 73.1
AUR62036922 Chenopodium quinoa HOM05D004878 ORTHO05D006497 6.9e-23 110.2 67 73.1
Ca_04469_v3 Cicer arietinum L. HOM05D004878 ORTHO05D006497 6.9e-23 110.2 67 73.1
Gohir.D05G147200 Gossypium hirsutum HOM05D004878 ORTHO05D006497 1.2e-22 109.4 67 73.1
Gorai.009G151200 Gossypium raimondii HOM05D004878 ORTHO05D006497 1.2e-22 109.4 67 73.1
Lj6g0027572 Lotus japonicus HOM05D004878 ORTHO05D006497 1.2e-22 109.4 67 73.1
Medtr0151s0030 Medicago truncatula HOM05D004878 ORTHO05D006497 1.2e-22 109.4 67 73.1
ECA246G0899 Erigeron canadensis HOM05D004878 ORTHO05D006497 1.5e-22 109.0 67 70.1
Gohir.A05G144900 Gossypium hirsutum HOM05D004878 ORTHO05D006497 1.5e-22 109.0 67 73.1
AUR62032164 Chenopodium quinoa HOM05D004878 ORTHO05D006497 2.0e-22 108.6 67 73.1
Gohir.D05G147300 Gossypium hirsutum HOM05D004878 ORTHO05D006497 2.0e-22 108.6 67 73.1
Gorai.009G151300 Gossypium raimondii HOM05D004878 ORTHO05D006497 2.0e-22 108.6 67 73.1
Aa31LG2G15140 Aethionema arabicum HOM05D004878 ORTHO05D006497 2.6e-22 108.2 67 74.6
COL.COLO4_30984 Corchorus olitorius HOM05D004878 ORTHO05D006497 3.4e-22 107.8 67 73.1
Eucgr.E01881 Eucalyptus grandis HOM05D004878 ORTHO05D006497 3.4e-22 107.8 67 71.6
Ah.02g114390 Amaranthus hybridus HOM05D004878 ORTHO05D006497 7.6e-22 106.7 67 68.7
Hund02535 Selenicereus undatus HOM05D004878 ORTHO05D006497 7.6e-22 106.7 67 70.1
Sc10g0005320 Simmondsia chinensis HOM05D004878 ORTHO05D006497 1.0e-21 106.3 67 70.1
Lalb_Chr11g0072281 Lupinus albus HOM05D004878 ORTHO05D006497 1.7e-21 105.5 67 70.1
Gohir.A05G144800 Gossypium hirsutum HOM05D004878 ORTHO05D006497 3.8e-21 104.4 67 71.6
Prupe.4G110600 Prunus persica HOM05D004878 ORTHO05D006497 8.4e-21 103.2 66 71.2
CDE05G2830 Ceratophyllum demersum HOM05D004878 ORTHO05D006497 2.5e-20 101.7 67 70.1
SEGI_01553 Sequoiadendron giganteum HOM05D004878 ORTHO05D006497 7.1e-20 100.1 67 64.2
MD05G1253300 Malus domestica HOM05D004878 ORTHO05D006497 2.7e-19 98.2 67 70.1
Mapoly0024s0023 Marchantia polymorpha HOM05D004878 ORTHO05D006497 2.7e-19 98.2 64 68.8
MD10G1234300 Malus domestica HOM05D004878 ORTHO05D006497 3.5e-19 97.8 54 79.6
SMO351G0334 Selaginella moellendorffii HOM05D004878 ORTHO05D006497 1.0e-18 96.3 64 67.2
Sabra12G0088600 Salix brachista HOM05D004878 ORTHO05D006497 1.3e-18 95.9 107 49.5
Sabra12G0091900 Salix brachista HOM05D004878 ORTHO05D006497 1.3e-18 95.9 107 49.5
FAN25G2275 Fragaria x ananassa HOM05D004878 ORTHO05D006497 3.9e-18 94.4 54 81.5
AagrBONN_evm.TU.Sc2ySwM_228.275 Anthoceros agrestis HOM05D004878 ORTHO05D006497 8.7e-18 93.2 64 67.2
CBR_g30341 Chara braunii HOM05D004878 ORTHO05D006497 1.9e-17 92.0 65 64.6
Pp3c21_18140 Physcomitrium patens HOM05D004878 ORTHO05D006497 3.3e-17 91.3 65 61.5
RcHm_v2.0_Chr5g0019951 Rosa chinensis HOM05D004878 ORTHO05D006497 2.8e-16 88.2 94 50.0
MD05G1254000 Malus domestica HOM05D001295 ORTHO05D002125 3.4e-14 81.3 51 74.5
MD05G1355200 Malus domestica HOM05D004878 ORTHO05D006497 7.2e-12 73.6 45 68.9
PGR042G0940 Punica granatum HOM05D004878 ORTHO05D006497 1.1e-09 66.2 59 57.6
Cre02.g109600 Chlamydomonas reinhardtii HOM05D004878 ORTHO05D006497 3.3e-09 64.7 66 42.4
FAN21G2052 Fragaria x ananassa HOM05D004878 ORTHO05D006497 4.3e-09 64.3 37 78.4
MELO3C025560.2 Cucumis melo HOM05D004878 ORTHO05D006497 1.3e-08 62.8 36 80.6
Cre02.g085900 Chlamydomonas reinhardtii HOM05D004878 ORTHO05D006497 2.8e-08 61.6 62 41.9
QL11p018003 Quercus lobata HOM05D000121 ORTHO05D000102 1.4e-07 59.3 35 74.3
Hma1.2p1_0185F.1_g081360 Hydrangea macrophylla HOM05D004878 ORTHO05D006497 2.4e-07 58.5 37 73.0
Nn7g38129 Nelumbo nucifera HOM05D004878 ORTHO05D006497 9.1e-07 56.6 36 72.2
HPP92_027573 Vanilla planifolia HOM05D004878 ORTHO05D006497 7.7e-06 53.5 31 71.0


User provided reference genes

Program Settings