Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.9e-76 288.5 148 100.0
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.0e-41 173.7 139 74.8
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.4e-41 173.3 139 73.4
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 1.2e-40 170.2 139 73.4
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.3e-39 166.8 139 71.9
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.3e-39 166.8 138 71.0
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 1.7e-39 166.4 140 69.3
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 2.8e-39 165.6 139 69.8
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 2.8e-39 165.6 139 70.5
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.1e-38 163.7 139 69.1
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.1e-38 163.7 148 68.2
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 1.4e-38 163.3 140 68.6
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 1.4e-38 163.3 140 69.3
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.4e-38 163.3 140 67.1
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.8e-38 162.9 139 69.1
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.8e-38 162.9 139 69.1
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.4e-38 162.5 139 69.8
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 3.1e-38 162.2 139 68.3
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 5.4e-38 161.4 139 68.3
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 7.0e-38 161.0 139 68.3
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 7.0e-38 161.0 139 69.1
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 7.0e-38 161.0 141 68.1
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 9.2e-38 160.6 139 66.9
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 1.2e-37 160.2 139 69.1
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.2e-37 160.2 140 67.1
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 1.2e-37 160.2 138 68.1
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 1.6e-37 159.8 139 66.2
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.0e-37 159.5 139 68.3
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 2.0e-37 159.5 141 66.7
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 2.7e-37 159.1 139 66.9
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 3.5e-37 158.7 139 66.9
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 4.5e-37 158.3 139 68.3
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 5.9e-37 157.9 141 65.2
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 5.9e-37 157.9 141 65.2
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 5.9e-37 157.9 139 66.9
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 5.9e-37 157.9 139 66.9
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 7.8e-37 157.5 139 69.1
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 7.8e-37 157.5 139 69.1
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 7.8e-37 157.5 139 66.2
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.0e-36 157.1 139 65.5
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.0e-36 157.1 139 65.5
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.0e-36 157.1 139 67.6
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.3e-36 156.8 139 66.2
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.7e-36 156.4 139 67.6
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 1.7e-36 156.4 139 68.3
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.3e-36 156.0 147 63.9
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 2.9e-36 155.6 139 67.6
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.9e-36 155.6 139 66.9
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 2.9e-36 155.6 139 68.3
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 2.9e-36 155.6 139 67.6
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 3.8e-36 155.2 139 64.7
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 3.8e-36 155.2 139 66.2
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 5.0e-36 154.8 139 67.6
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.1e-35 153.7 139 65.5
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 1.1e-35 153.7 134 66.4
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.5e-35 153.3 139 66.9
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 2.5e-35 152.5 139 66.9
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 4.3e-35 151.8 138 65.2
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 5.6e-35 151.4 139 65.5
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 5.6e-35 151.4 139 64.0
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 9.5e-35 150.6 139 64.0
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.2e-34 150.2 140 62.9
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.6e-34 149.8 139 62.6
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.6e-34 149.8 139 63.3
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 2.1e-34 149.4 139 63.3
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.7e-34 148.3 120 70.0
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 8.0e-34 147.5 146 61.6
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 1.0e-33 147.1 139 62.6
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.0e-33 147.1 139 63.3
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 1.8e-33 146.4 139 64.7
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 4.0e-33 145.2 146 60.3
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 8.9e-33 144.1 146 59.6
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 8.9e-33 144.1 146 60.3
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.2e-32 143.7 146 59.6
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.5e-32 143.3 146 60.3
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 2.0e-32 142.9 139 61.9
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 2.0e-32 142.9 146 59.6
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 2.6e-32 142.5 168 57.1
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 7.5e-32 141.0 139 62.6
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 9.8e-32 140.6 140 61.4
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 1.7e-31 139.8 146 57.5
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 2.2e-31 139.4 139 61.9
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 4.9e-31 138.3 146 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 2.4e-30 136.0 139 54.7
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 3.2e-30 135.6 139 59.7
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 3.2e-30 135.6 139 59.7
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 3.2e-30 135.6 120 67.5
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 3.5e-29 132.1 109 72.5
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 7.8e-29 131.0 139 56.8
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 8.6e-28 127.5 124 58.9
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.5e-27 126.7 120 65.0
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 1.2e-26 123.6 111 65.8
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 3.6e-26 122.1 128 60.2
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 6.2e-26 121.3 111 63.1
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 6.2e-26 121.3 170 48.8
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.4e-25 120.2 120 60.8
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 4.0e-25 118.6 78 82.1
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 4.0e-25 118.6 134 50.7
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 9.8e-24 114.0 140 49.3
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 4.9e-23 111.7 78 76.9
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 4.9e-23 111.7 110 62.7
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 2.4e-22 109.4 85 71.8
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 1.0e-20 104.0 81 74.1
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 8.6e-20 100.9 119 54.6
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 6.2e-18 94.7 66 77.3
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 2.3e-17 92.8 96 56.2
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.5e-16 90.1 103 54.4
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 2.0e-16 89.7 136 41.9
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.3e-15 87.0 138 44.9
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.4e-14 83.6 89 59.6
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 2.4e-14 82.8 142 39.4
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 9.2e-14 80.9 156 43.6
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 4.6e-13 78.6 95 53.7
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.0e-12 77.4 86 54.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 8.6e-12 74.3 66 62.1
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.2e-10 70.5 68 58.8
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.8e-09 66.6 132 33.3
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 6.8e-09 64.7 52 61.5
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 1.5e-08 63.5 61 59.0
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.5e-08 63.5 97 51.5
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 6.4e-07 58.2 69 52.2
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.4e-06 57.0 45 71.1
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.4e-06 57.0 68 54.4
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 5.4e-06 55.1 45 66.7


User provided reference genes

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