Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033938 Camellia sinensis var. sinensis HOM05D008750 ORTHO05D010839 4.4e-80 301.2 151 100.0
Dinv42750 Davidia involucrata HOM05D008750 ORTHO05D010839 5.3e-25 118.2 97 61.9
Dinv43352 Davidia involucrata HOM05D008750 ORTHO05D010839 5.3e-25 118.2 97 61.9
Rhsim03G0263300 Rhododendron simsii HOM05D008750 ORTHO05D010839 3.4e-24 115.5 152 48.0
Rhsim03G0263400 Rhododendron simsii HOM05D008750 ORTHO05D010839 2.9e-23 112.5 118 49.2
Rhsim01G0007300 Rhododendron simsii HOM05D008750 ORTHO05D010839 1.1e-17 94.0 85 54.1
Lj7C470T7 Lonicera japonica HOM05D008750 ORTHO05D010839 4.1e-17 92.0 124 45.2
Lj2C67T7 Lonicera japonica HOM05D008750 ORTHO05D010839 2.0e-16 89.7 78 53.8
Lj7C470T6 Lonicera japonica HOM05D008750 ORTHO05D010839 5.0e-15 85.1 104 48.1
Eucgr.C02392 Eucalyptus grandis HOM05D008750 ORTHO05D010839 2.5e-14 82.8 97 46.4
Manes.06G024500 Manihot esculenta HOM05D008750 ORTHO05D010839 2.5e-14 82.8 83 51.8
ECA236G4119 Erigeron canadensis HOM05D008750 ORTHO05D010839 5.5e-14 81.6 138 40.6
Manes.06G024650 Manihot esculenta HOM05D008750 ORTHO05D010839 1.2e-13 80.5 80 50.0
Thecc.09G167900 Theobroma cacao HOM05D008750 ORTHO05D010839 1.6e-13 80.1 96 45.8
COL.COLO4_38410 Corchorus olitorius HOM05D008750 ORTHO05D010839 3.6e-13 79.0 127 40.2
MELO3C004079.2 Cucumis melo HOM05D008750 ORTHO05D010839 8.0e-13 77.8 80 48.8
DCAR_017963 Daucus carota HOM05D008750 ORTHO05D010839 8.0e-13 77.8 92 44.6
Lj1C678T11 Lonicera japonica HOM05D000487 ORTHO05D000405 1.8e-12 76.6 99 43.4
Duzib168G0353 Durio zibethinus HOM05D008750 ORTHO05D010839 5.2e-12 75.1 76 50.0
DCAR_017962 Daucus carota HOM05D008750 ORTHO05D010839 1.5e-11 73.6 92 43.5
DCAR_017964 Daucus carota HOM05D008750 ORTHO05D010839 2.6e-11 72.8 88 45.5
COL.COLO4_38413 Corchorus olitorius HOM05D008750 ORTHO05D010839 2.2e-10 69.7 94 44.7
AUR62016235 Chenopodium quinoa HOM05D008750 ORTHO05D010839 2.8e-10 69.3 74 51.4
CsaV3_2G008040 Cucumis sativus L. HOM05D008750 ORTHO05D010839 3.7e-10 68.9 73 46.6
Lsat_1_v5_gn_8_66061 Lactuca sativa HOM05D008750 ORTHO05D010839 3.7e-10 68.9 110 42.7
AUR62041658 Chenopodium quinoa HOM05D008750 ORTHO05D010839 4.8e-10 68.6 91 47.3
DCAR_017961 Daucus carota HOM05D008750 ORTHO05D010839 8.2e-10 67.8 84 45.2
HanXRQChr05g0137541 Helianthus annuus HOM05D008750 ORTHO05D010839 8.2e-10 67.8 104 42.3
Lsat_1_v5_gn_8_66041 Lactuca sativa HOM05D008750 ORTHO05D010839 8.2e-10 67.8 110 41.8
ECA236G4277 Erigeron canadensis HOM05D008750 ORTHO05D010839 1.1e-09 67.4 109 44.0
Lsat_1_v5_gn_8_65921 Lactuca sativa HOM05D008750 ORTHO05D010839 2.4e-09 66.2 109 39.4
EL10Ac3g05536 Beta vulgaris HOM05D008750 ORTHO05D010839 5.3e-09 65.1 91 48.4
ECA236G3374 Erigeron canadensis HOM05D008750 ORTHO05D010839 1.2e-08 63.9 118 39.0
DCAR_017960 Daucus carota HOM05D008750 ORTHO05D010839 5.9e-08 61.6 106 41.5
TAR622G0042 Trochodendron aralioides HOM05D041019 ORTHO05D010839 1.9e-06 56.6 79 43.0
Nn4g24057 Nelumbo nucifera HOM05D041019 ORTHO05D010839 4.2e-06 55.5 78 42.3


User provided reference genes

Program Settings