Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033904 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.3e-57 226.1 110 100.0
CSS0008993 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.1e-51 206.5 110 91.8
CSS0007190 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 2.3e-49 198.7 110 90.0
CSS0048741 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.8e-46 189.1 101 92.1
CSS0038232 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 1.8e-43 179.1 109 80.7
CSS0044750 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 5.4e-43 177.6 96 88.5
CSS0046742 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 2.5e-40 168.7 110 80.0
Dinv34774 Davidia involucrata HOM05D000690 ORTHO05D001022 7.6e-21 104.0 101 59.4
Dinv32913 Davidia involucrata HOM05D000690 ORTHO05D001022 7.1e-19 97.4 101 56.4
Rhsim01G0273400 Rhododendron simsii HOM05D000690 ORTHO05D001022 1.5e-16 89.7 113 49.6
TAR365G1196 Trochodendron aralioides HOM05D000690 ORTHO05D001022 9.6e-16 87.0 92 52.2
Actinidia24907 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.6e-15 86.3 99 53.5
Actinidia00779 Actinidia chinensis HOM05D000690 ORTHO05D001022 2.1e-15 85.9 83 57.8
Hma1.2p1_0667F.1_g199720 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 1.4e-14 83.2 101 50.5
QL12p021077 Quercus lobata HOM05D000690 ORTHO05D001022 2.0e-13 79.3 106 49.1
Duzib138G1276 Durio zibethinus HOM05D000690 ORTHO05D001022 2.9e-12 75.5 107 48.6
CiPaw.07G089900 Carya illinoinensis HOM05D000690 ORTHO05D001022 3.8e-12 75.1 106 48.1
Lju41C26G6 Lonicera japonica HOM05D000690 ORTHO05D001022 6.4e-12 74.3 92 50.0
Nn6g34094 Nelumbo nucifera HOM05D000690 ORTHO05D001022 6.4e-12 74.3 99 44.4
TAR633G0554 Trochodendron aralioides HOM05D000690 ORTHO05D001022 8.4e-12 73.9 92 44.6
Duzib211G0670 Durio zibethinus HOM05D000690 ORTHO05D001022 1.1e-11 73.6 107 48.6
Thecc.01G275400 Theobroma cacao HOM05D000690 ORTHO05D001022 1.9e-11 72.8 108 46.3
Prupe.8G238300 Prunus persica HOM05D000690 ORTHO05D001022 3.2e-11 72.0 112 42.0
GSVIVG01001173001 Vitis vinifera HOM05D000690 ORTHO05D001022 3.2e-11 72.0 104 45.2
MSTRG.21547 Avicennia marina HOM05D000690 ORTHO05D001022 5.4e-11 71.2 103 44.7
Cfa006164 Carpinus fangiana HOM05D000690 ORTHO05D001022 5.4e-11 71.2 103 43.7
RcHm_v2.0_Chr6g0290641 Rosa chinensis HOM05D000690 ORTHO05D001022 7.1e-11 70.9 108 47.2
MSTRG.17455 Avicennia marina HOM05D000690 ORTHO05D001022 2.1e-10 69.3 105 42.9
Sabra05G0161600 Salix brachista HOM05D000690 ORTHO05D001022 7.8e-10 67.4 105 40.0
TAR362G0245 Trochodendron aralioides HOM05D000690 ORTHO05D001022 7.8e-10 67.4 99 43.4
CSS0047845 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 1.3e-09 66.6 52 65.4
Hund27938 Selenicereus undatus HOM05D000690 ORTHO05D001022 1.3e-09 66.6 104 44.2
Dinv14007 Davidia involucrata HOM05D000690 ORTHO05D001022 1.7e-09 66.2 96 40.6
Nn1g06216 Nelumbo nucifera HOM05D000690 ORTHO05D001022 1.7e-09 66.2 99 43.4
PSO761G0687 Papaver somniferum HOM05D000690 ORTHO05D001022 2.3e-09 65.9 98 42.9
Prupe.1G016000 Prunus persica HOM05D000690 ORTHO05D001022 2.3e-09 65.9 91 41.8
Hund02827 Selenicereus undatus HOM05D000690 ORTHO05D001022 2.3e-09 65.9 104 43.3
MSTRG.18247 Avicennia marina HOM05D000690 ORTHO05D001022 3.0e-09 65.5 105 44.8
FvH4_2g23270 Fragaria vesca HOM05D000690 ORTHO05D001022 3.0e-09 65.5 104 47.1
Duzib133G1531 Durio zibethinus HOM05D000690 ORTHO05D001022 3.9e-09 65.1 110 42.7
Gorai.007G138400 Gossypium raimondii HOM05D000690 ORTHO05D001022 5.1e-09 64.7 107 44.9
Nn1g02358 Nelumbo nucifera HOM05D000690 ORTHO05D001022 5.1e-09 64.7 99 42.4
Sabra02G0041500 Salix brachista HOM05D000690 ORTHO05D001022 5.1e-09 64.7 105 41.9
Cfa011182 Carpinus fangiana HOM05D000690 ORTHO05D001022 6.6e-09 64.3 97 44.3
FAN15G2082 Fragaria x ananassa HOM05D000690 ORTHO05D001022 6.6e-09 64.3 104 47.1
FAN20G1467 Fragaria x ananassa HOM05D000690 ORTHO05D001022 6.6e-09 64.3 104 46.2
Gohir.D11G129400 Gossypium hirsutum HOM05D000690 ORTHO05D001022 6.6e-09 64.3 107 44.9
Hund09504 Selenicereus undatus HOM05D000690 ORTHO05D001022 6.6e-09 64.3 101 42.6
Haze_00880 Corylus avellana HOM05D000690 ORTHO05D001022 8.7e-09 63.9 97 44.3
Manes.01G206000 Manihot esculenta HOM05D000690 ORTHO05D001022 1.1e-08 63.5 105 40.0
FAN24G1198 Fragaria x ananassa HOM05D000690 ORTHO05D001022 1.5e-08 63.2 104 46.2
FAN27G0350 Fragaria x ananassa HOM05D000690 ORTHO05D001022 1.5e-08 63.2 104 46.2
Rhsim02G0026200 Rhododendron simsii HOM05D000690 ORTHO05D001022 1.5e-08 63.2 93 44.1
Potri.002G050800 Populus trichocarpa HOM05D000690 ORTHO05D001022 2.5e-08 62.4 106 41.5
PSO210G6390 Papaver somniferum HOM05D000690 ORTHO05D001022 3.3e-08 62.0 99 43.4
SalBow6G0182 Salvia bowleyana HOM05D000690 ORTHO05D001022 3.3e-08 62.0 80 50.0
CANSAT25G1016 Cannabis sativa HOM05D000690 ORTHO05D001022 5.6e-08 61.2 114 42.1
Gohir.A11G124200 Gossypium hirsutum HOM05D000690 ORTHO05D001022 5.6e-08 61.2 107 43.0
Hma1.2p1_0822F.1_g224320 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 1.6e-07 59.7 94 43.6
Aqoxy2G03413 Aquilegia oxysepala HOM05D000690 ORTHO05D001022 2.1e-07 59.3 105 39.0
Actinidia36952 Actinidia chinensis HOM05D000690 ORTHO05D001022 2.8e-07 58.9 87 41.4
Potri.005G211500 Populus trichocarpa HOM05D000690 ORTHO05D001022 4.8e-07 58.2 105 35.2
Manes.03G176900 Manihot esculenta HOM05D000690 ORTHO05D001022 8.1e-07 57.4 98 40.8
Actinidia23523 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.1e-06 57.0 96 37.5
Cpa.g.sc487.5 Carica papaya HOM05D000690 ORTHO05D001022 1.1e-06 57.0 103 41.7
Rhsim04G0201300 Rhododendron simsii HOM05D000690 ORTHO05D001022 3.1e-06 55.5 85 41.2
SalBow4G1715 Salvia bowleyana HOM05D000690 ORTHO05D001022 3.1e-06 55.5 66 53.0
vmacro15352 Vaccinium macrocarpon HOM05D000690 ORTHO05D001022 3.1e-06 55.5 119 37.8
COL.COLO4_09065 Corchorus olitorius HOM05D000690 ORTHO05D001022 4.0e-06 55.1 111 41.4
Aqoxy5G00446 Aquilegia oxysepala HOM05D000690 ORTHO05D001022 5.3e-06 54.7 104 40.4
Gorai.012G060900 Gossypium raimondii HOM05D000690 ORTHO05D022135 6.9e-06 54.3 74 48.6
unitig_0.g130 Utricularia gibba HOM05D000690 ORTHO05D001022 9.0e-06 53.9 85 43.5


User provided reference genes

Program Settings