Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.9e-281 969.9 470 100.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 6.4e-218 760.8 494 78.1
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 5.8e-211 737.6 485 77.5
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.9e-209 732.6 494 75.5
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 6.8e-196 687.6 487 71.9
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.2e-189 666.8 477 69.8
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 5.8e-187 657.9 474 67.7
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.6e-184 649.8 466 68.5
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.6e-184 648.3 476 66.8
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 7.6e-179 630.9 487 66.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 5.4e-177 624.8 485 65.2
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 7.1e-177 624.4 443 68.4
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.6e-173 613.2 477 65.8
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 4.0e-172 608.6 495 62.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 1.2e-171 607.1 475 65.7
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.6e-171 605.9 460 67.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 4.9e-170 601.7 483 64.4
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.9e-169 599.7 448 66.3
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 2.5e-169 599.4 479 64.9
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 4.2e-169 598.6 443 67.5
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.0e-167 592.4 480 63.3
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 8.7e-167 590.9 400 72.2
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 8.7e-167 590.9 500 63.0
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.9e-166 589.7 481 62.8
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 2.5e-166 589.3 448 65.0
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 2.5e-166 589.3 480 62.5
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.1e-164 583.9 464 63.1
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.1e-164 583.9 363 77.4
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.8e-164 583.2 481 62.4
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 2.4e-164 582.8 493 61.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.0e-164 582.0 476 62.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.2e-163 580.5 475 62.7
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 2.0e-163 579.7 491 61.5
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.3e-162 577.0 499 61.1
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.3e-162 577.0 499 61.1
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.2e-162 576.2 489 59.7
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 4.9e-162 575.1 455 62.4
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 4.2e-161 572.0 461 62.9
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.2e-160 570.5 495 60.6
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.5e-160 568.9 473 61.7
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.3e-159 567.0 458 61.4
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.8e-159 566.6 463 60.9
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 5.1e-159 565.1 458 60.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 3.7e-157 558.9 472 61.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-156 557.0 494 60.3
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.4e-156 556.2 438 63.2
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.1e-156 555.4 460 60.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 5.3e-156 555.1 494 59.9
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 6.9e-156 554.7 466 61.6
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 3.4e-155 552.4 431 65.0
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 7.7e-155 551.2 455 60.2
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 3.8e-154 548.9 450 60.9
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 5.0e-154 548.5 489 58.1
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.4e-153 547.0 462 63.0
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 4.2e-153 545.4 462 62.1
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 4.2e-153 545.4 458 59.0
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.2e-152 543.9 472 57.6
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.2e-152 543.9 449 60.6
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.1e-152 543.1 482 59.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 3.6e-152 542.3 426 63.6
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 4.6e-152 542.0 436 63.8
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 6.1e-152 541.6 458 59.2
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.0e-151 540.8 447 61.3
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.5e-150 537.0 473 58.1
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.0e-150 536.6 425 63.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 5.7e-150 535.0 425 63.3
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.7e-149 533.5 372 65.9
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-148 530.8 437 61.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.4e-148 529.6 478 59.8
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.1e-148 528.9 497 54.3
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 3.0e-143 512.7 473 57.7
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.1e-143 511.9 473 57.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 6.7e-143 511.5 475 57.9
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.3e-142 509.2 473 57.5
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-142 508.4 473 56.9
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.3e-141 507.3 451 59.2
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 4.8e-141 505.4 508 54.5
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.1e-140 502.3 475 56.6
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.7e-139 498.0 471 55.8
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.3e-138 497.3 423 57.7
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.8e-138 495.7 440 59.1
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 6.1e-136 488.4 466 54.3
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.4e-135 487.3 416 59.6
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 1.4e-135 487.3 450 56.2
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 3.0e-135 486.1 415 59.5
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 5.2e-135 485.3 453 55.6
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 8.8e-135 484.6 428 57.9
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.5e-134 483.8 423 59.1
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 7.4e-134 481.5 479 54.3
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.3e-133 480.7 461 55.3
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.8e-132 476.9 441 56.0
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.9e-129 466.8 458 54.6
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 7.2e-129 464.9 465 54.0
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 7.2e-129 464.9 465 54.0
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 7.2e-129 464.9 465 54.0
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.0e-127 459.1 452 54.4
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.2e-127 458.8 399 54.6
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.5e-121 439.9 419 55.1
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.3e-109 401.0 404 48.8
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.6e-107 394.0 301 65.8
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-105 387.9 473 48.8
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.6e-83 314.3 258 61.6
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.1e-83 313.9 361 46.8
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.1e-83 313.9 207 69.6
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 4.6e-83 312.8 315 54.6
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.1e-79 301.6 491 40.1
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 7.6e-78 295.4 384 44.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 5.3e-71 272.7 392 40.6
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 5.6e-65 252.7 312 45.8
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 4.6e-59 233.0 387 38.0
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.3e-50 204.9 218 56.4
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 3.2e-36 157.1 112 67.9
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 2.2e-32 144.4 182 45.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.2e-32 142.5 381 32.3
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 6.9e-31 139.4 140 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.5e-30 138.3 378 29.6
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.6e-30 137.5 418 28.7
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.4e-28 131.7 394 30.5
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.2e-27 128.6 335 33.4
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.3e-21 108.6 64 73.4
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 2.8e-08 64.3 66 47.0


User provided reference genes

Program Settings