Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033842 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 9.6e-32 139.4 65 100.0
CSS0049036 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 9.6e-32 139.4 65 100.0
Dinv44083 Davidia involucrata HOM05D001119 ORTHO05D000862 7.4e-16 86.7 63 61.9
Rhsim01G0137200 Rhododendron simsii HOM05D001119 ORTHO05D000862 9.6e-16 86.3 58 67.2
vmacro13478 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 1.4e-11 72.4 46 71.7
Lj7A541G77 Lonicera japonica HOM05D001119 ORTHO05D000862 4.2e-11 70.9 61 44.3
Sed0016988 Sechium edule HOM05D001119 ORTHO05D000862 7.2e-11 70.1 57 47.4
MELO3C005973.2 Cucumis melo HOM05D001119 ORTHO05D000862 2.1e-10 68.6 66 42.4
CsaV3_3G007510 Cucumis sativus L. HOM05D001119 ORTHO05D000862 2.7e-10 68.2 66 42.4
Ciclev10024012m.g Citrus clementina HOM05D001119 ORTHO05D000862 3.5e-10 67.8 60 46.7
Manes.01G271400 Manihot esculenta HOM05D001119 ORTHO05D000862 3.5e-10 67.8 61 49.2
Potri.014G054900 Populus trichocarpa HOM05D001119 ORTHO05D000862 6.1e-10 67.0 66 43.9
Sed0023743 Sechium edule HOM05D001119 ORTHO05D000862 7.9e-10 66.6 58 44.8
RcHm_v2.0_Chr1g0346521 Rosa chinensis HOM05D001119 ORTHO05D000862 1.0e-09 66.2 53 45.3
ClCG05G000350 Citrullus lanatus HOM05D001119 ORTHO05D000862 2.3e-09 65.1 58 43.1
FvH4_7g09600 Fragaria vesca HOM05D001119 ORTHO05D000862 5.1e-09 63.9 53 43.4
Prupe.7G081400 Prunus persica HOM05D001119 ORTHO05D000862 5.1e-09 63.9 61 41.0
FAN10G3081 Fragaria x ananassa HOM05D001119 ORTHO05D000862 8.7e-09 63.2 53 41.5
Sabra14G0040600 Salix brachista HOM05D001119 ORTHO05D000862 1.1e-08 62.8 59 44.1
Sed0019479 Sechium edule HOM05D001119 ORTHO05D000862 1.1e-08 62.8 58 39.7
FAN03G1298 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.9e-08 62.0 54 40.7
FAN10G2844 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.9e-08 62.0 52 42.3
Sc23g0001530 Simmondsia chinensis HOM05D001119 ORTHO05D000862 2.5e-08 61.6 56 39.3
QL04p033568 Quercus lobata HOM05D001119 ORTHO05D000862 3.3e-08 61.2 62 38.7
THA.LOC104817197 Tarenaya hassleriana HOM05D001119 ORTHO05D000862 5.7e-08 60.5 66 37.9
MD07G1100200 Malus domestica HOM05D001119 ORTHO05D000862 2.2e-07 58.5 59 37.3
Haze_02761 Corylus avellana HOM05D001119 ORTHO05D000862 3.7e-07 57.8 63 36.5
Cfa011109 Carpinus fangiana HOM05D001119 ORTHO05D000862 4.8e-07 57.4 63 36.5
TWI23G0964 Tripterygium wilfordii HOM05D001119 ORTHO05D000862 4.8e-07 57.4 68 35.3
Sp4g27000 Schrenkiella parvula HOM05D011438 ORTHO05D000862 5.3e-06 53.9 57 36.8
A05p05040 Brassica napus HOM05D011438 ORTHO05D000862 9.0e-06 53.1 52 36.5


User provided reference genes

Program Settings