Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033824 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 1.7e-176 622.5 298 100.0
CSS0033539 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 8.8e-173 610.1 298 97.7
Rhsim13G0155700 Rhododendron simsii HOM05D011823 ORTHO05D014382 3.0e-72 276.2 303 50.5
CSS0007058 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 2.8e-46 189.9 204 52.0
Cfa000242 Carpinus fangiana HOM05D011823 ORTHO05D014382 5.6e-26 122.5 269 33.5
CSS0022060 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 6.6e-19 99.0 111 48.6
Aqoxy7G02866 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 8.6e-19 98.6 245 31.8
Aqoxy7G02867 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.6e-17 94.4 246 28.9
Aqoxy5G01533 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 8.1e-17 92.0 247 31.2
Aqoxy2G00144 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 4.0e-16 89.7 306 27.1
COL.COLO4_36569 Corchorus olitorius HOM05D002077 ORTHO05D000818 5.4e-13 79.3 238 27.7
TAR627G0443 Trochodendron aralioides HOM05D002077 ORTHO05D000818 7.1e-13 79.0 158 35.4
Aqoxy7G02717 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 2.1e-12 77.4 137 35.8
CSS0029340 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D000818 1.3e-11 74.7 251 27.1
Aqoxy4G02851 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 3.6e-09 66.6 245 25.3
Ciclev10021301m.g Citrus clementina HOM05D002077 ORTHO05D000818 8.1e-09 65.5 238 27.7
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 3.1e-08 63.5 257 23.0
Aqoxy2G00214 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 5.2e-08 62.8 164 31.1
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 5.2e-08 62.8 243 25.9
Thecc.07G038400 Theobroma cacao HOM05D002077 ORTHO05D000818 8.9e-08 62.0 305 25.6
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 2.6e-07 60.5 252 28.2
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 7.6e-07 58.9 248 26.2
FvH4_7g29350 Fragaria vesca HOM05D002077 ORTHO05D000818 7.6e-07 58.9 302 25.5
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 7.6e-07 58.9 302 25.5
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 7.6e-07 58.9 302 25.5
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 7.6e-07 58.9 302 25.5
RcHm_v2.0_Chr1g0377111 Rosa chinensis HOM05D002077 ORTHO05D000818 9.9e-07 58.5 266 25.6
Prupe.2G293100 Prunus persica HOM05D002077 ORTHO05D000818 1.3e-06 58.2 193 26.4
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 1.7e-06 57.8 248 27.0
DCAR_009358 Daucus carota HOM05D002077 ORTHO05D000818 2.2e-06 57.4 242 26.9
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 2.2e-06 57.4 313 22.4
MBI18_g44743_MAGBIO Magnolia biondii HOM05D002077 ORTHO05D000818 2.2e-06 57.4 237 24.5
Manes.06G146400 Manihot esculenta HOM05D002077 ORTHO05D000818 2.9e-06 57.0 241 25.7
Lsat_1_v5_gn_7_32400 Lactuca sativa HOM05D000710 ORTHO05D000336 3.8e-06 56.6 239 25.5
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 3.8e-06 56.6 244 27.9
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 4.9e-06 56.2 309 24.9
ATR0019G010 Amborella trichopoda HOM05D003333 ORTHO05D003836 6.4e-06 55.8 259 23.2
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 8.4e-06 55.5 241 24.5


User provided reference genes

Program Settings