Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 4.2e-79 298.1 170 100.0
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 9.8e-52 207.2 165 72.1
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 3.5e-49 198.7 161 69.6
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.9e-47 193.0 159 68.6
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 8.9e-45 184.1 161 67.1
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.9e-43 178.3 169 62.7
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 5.4e-42 174.9 167 60.5
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 8.9e-37 157.5 159 59.7
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.2e-36 157.1 160 62.5
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 9.8e-36 154.1 160 61.2
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.9e-35 152.5 178 56.2
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 6.4e-35 151.4 161 58.4
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 9.2e-34 147.5 162 55.6
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 3.5e-33 145.6 162 54.9
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 2.3e-32 142.9 164 53.7
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 1.5e-31 140.2 163 53.4
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 1.5e-31 140.2 162 51.9
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 2.5e-31 139.4 158 57.0
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.2e-30 137.1 157 59.9
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.1e-29 134.0 166 50.6
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.8e-29 133.3 162 53.7
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 3.1e-29 132.5 164 54.9
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 8.9e-29 131.0 181 49.2
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.2e-28 130.6 164 54.3
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.2e-28 130.6 161 55.3
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.5e-28 130.2 164 53.7
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 4.4e-28 128.6 160 52.5
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 2.2e-27 126.3 181 50.8
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 4.9e-27 125.2 167 49.7
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 8.4e-27 124.4 174 48.9
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 5.4e-26 121.7 161 52.2
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 2.1e-25 119.8 162 50.6
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 4.6e-25 118.6 144 52.8
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 6.0e-25 118.2 161 52.2
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 7.8e-25 117.9 159 50.9
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.3e-24 117.1 164 50.0
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.7e-24 116.7 177 45.8
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 2.3e-24 116.3 211 42.7
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 2.3e-24 116.3 162 50.0
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 8.6e-24 114.4 158 50.0
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 1.5e-23 113.6 153 51.0
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.3e-23 112.5 164 46.3
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 4.3e-23 112.1 161 48.4
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 2.8e-22 109.4 160 49.4
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 3.6e-22 109.0 160 47.5
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 8.1e-22 107.8 150 45.3
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.4e-21 107.1 160 48.8
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.4e-21 107.1 160 48.8
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.8e-21 106.7 181 44.2
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 1.8e-21 106.7 144 49.3
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 5.2e-21 105.1 159 47.8
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 8.9e-21 104.4 180 43.3
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 2.0e-20 103.2 173 45.7
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.6e-20 102.8 161 48.4
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.3e-19 100.5 159 47.8
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 3.8e-19 99.0 178 44.4
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 4.9e-19 98.6 159 47.8
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 4.9e-19 98.6 142 49.3
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.4e-18 97.1 118 54.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.4e-18 97.1 160 43.1
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.4e-18 97.1 161 45.3
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 2.4e-18 96.3 123 47.2
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 4.2e-18 95.5 176 43.8
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 5.4e-18 95.1 160 43.8
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.2e-17 94.0 166 45.8
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.6e-17 93.6 119 52.1
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 2.1e-17 93.2 142 47.9
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.5e-17 92.4 151 43.0
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.3e-16 90.5 173 42.8
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 1.3e-14 84.0 160 41.9
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 6.2e-14 81.6 160 39.4
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 8.1e-14 81.3 165 38.2
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.8e-13 80.1 160 40.0
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.8e-13 80.1 127 47.2
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 3.1e-13 79.3 160 41.2
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 5.3e-13 78.6 164 37.8
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 9.0e-13 77.8 164 42.1
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 1.2e-12 77.4 161 41.0
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.0e-12 76.6 148 40.5
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.6e-12 76.3 161 35.4
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 3.4e-12 75.9 164 40.2
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 4.5e-12 75.5 163 39.3
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 4.5e-12 75.5 163 39.3
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 4.5e-12 75.5 161 41.0
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 5.8e-12 75.1 167 39.5
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.6e-12 74.7 151 37.7
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 7.6e-12 74.7 158 39.2
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 9.9e-12 74.3 151 37.7
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.3e-11 73.9 158 39.2
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.3e-11 73.9 165 39.4
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 1.7e-11 73.6 162 37.0
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.9e-11 72.8 147 38.1
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 2.9e-11 72.8 161 37.9
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 3.8e-11 72.4 146 39.0
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 4.9e-11 72.0 100 50.0
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 8.4e-11 71.2 151 37.1
Haze_23070 Corylus avellana HOM05D005900 ORTHO05D007306 1.9e-10 70.1 165 38.8
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 3.2e-10 69.3 118 41.5
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 7.1e-10 68.2 178 36.5
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 1.0e-08 64.3 160 38.8
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.3e-08 63.9 183 35.0
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 8.7e-08 61.2 161 37.3
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.1e-07 60.8 173 36.4
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 9.6e-07 57.8 121 38.8
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.6e-06 57.0 165 32.1
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 2.1e-06 56.6 162 37.0
HPP92_000268 Vanilla planifolia HOM05D005900 ORTHO05D007306 2.8e-06 56.2 149 36.2
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 4.8e-06 55.5 160 36.2
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 4.8e-06 55.5 137 36.5
Sopen01g004270 Solanum pennellii HOM05D005900 ORTHO05D007306 6.2e-06 55.1 105 49.5
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 8.1e-06 54.7 87 41.4


User provided reference genes

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