Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 2.2e-108 395.6 196 100.0
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 3.2e-70 268.9 158 81.0
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 7.0e-70 267.7 167 78.4
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 1.0e-68 263.8 158 81.6
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 1.3e-68 263.5 158 80.4
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 2.3e-68 262.7 154 81.8
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 2.3e-68 262.7 154 81.8
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 2.3e-68 262.7 149 83.9
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 2.3e-68 262.7 157 78.3
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 3.0e-68 262.3 158 81.0
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 6.6e-68 261.2 155 80.0
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 6.6e-68 261.2 158 79.1
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 6.6e-68 261.2 145 86.9
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 8.6e-68 260.8 147 81.6
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 1.9e-67 259.6 189 68.3
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 4.3e-67 258.5 187 71.7
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 7.3e-67 257.7 145 82.8
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 1.2e-66 256.9 155 80.0
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 1.2e-66 256.9 155 80.0
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 2.8e-66 255.8 157 76.4
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 3.6e-66 255.4 157 77.7
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 4.7e-66 255.0 156 78.2
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 6.2e-66 254.6 158 77.2
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 8.1e-66 254.2 157 77.7
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 1.1e-65 253.8 179 70.9
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.1e-65 253.8 158 77.2
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.4e-65 253.4 158 77.2
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 3.1e-65 252.3 156 77.6
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 3.1e-65 252.3 158 77.2
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 3.1e-65 252.3 161 75.8
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 5.2e-65 251.5 157 76.4
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 8.9e-65 250.8 177 68.9
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 8.9e-65 250.8 155 76.8
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.2e-64 250.4 161 75.2
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 1.2e-64 250.4 154 76.6
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 1.5e-64 250.0 155 76.1
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 1.5e-64 250.0 155 72.9
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 2.0e-64 249.6 155 76.8
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 2.0e-64 249.6 157 73.9
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 2.0e-64 249.6 157 74.5
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 2.0e-64 249.6 152 77.0
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 2.6e-64 249.2 156 75.6
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 3.4e-64 248.8 149 78.5
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 3.4e-64 248.8 149 77.9
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 3.4e-64 248.8 158 75.3
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 3.4e-64 248.8 154 76.0
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 3.4e-64 248.8 160 73.8
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 4.4e-64 248.4 152 79.6
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 4.4e-64 248.4 153 75.8
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 5.8e-64 248.1 157 73.9
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 5.8e-64 248.1 151 77.5
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 5.8e-64 248.1 157 73.9
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 1.3e-63 246.9 152 77.6
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 1.3e-63 246.9 157 73.9
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 1.7e-63 246.5 154 76.0
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 2.2e-63 246.1 155 74.2
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 2.9e-63 245.7 157 72.6
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 3.7e-63 245.4 157 74.5
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 4.9e-63 245.0 155 74.2
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 4.9e-63 245.0 149 77.9
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 6.4e-63 244.6 149 78.5
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 6.4e-63 244.6 146 77.4
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 8.3e-63 244.2 146 80.1
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 8.3e-63 244.2 155 76.1
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.4e-62 242.7 152 76.3
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.4e-62 242.7 143 81.8
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 3.2e-62 242.3 156 72.4
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 3.2e-62 242.3 152 77.0
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 4.1e-62 241.9 152 76.3
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 1.6e-61 240.0 153 74.5
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.7e-61 239.2 147 74.1
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.7e-61 239.2 163 69.9
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 6.0e-61 238.0 152 75.0
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 1.0e-60 237.3 150 72.0
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 1.7e-60 236.5 152 74.3
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 1.7e-60 236.5 151 72.8
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 2.3e-60 236.1 150 75.3
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 8.6e-60 234.2 149 73.8
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 2.5e-59 232.6 157 69.4
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 2.5e-59 232.6 147 74.8
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 2.5e-59 232.6 146 75.3
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.3e-59 231.9 144 73.6
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 5.6e-59 231.5 157 72.0
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.2e-58 230.3 160 69.4
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 1.4e-57 226.9 143 72.7
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 2.4e-57 226.1 156 70.5
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 3.1e-57 225.7 138 76.1
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 4.0e-57 225.3 148 70.3
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 5.2e-57 224.9 146 71.2
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 5.8e-56 221.5 146 69.9
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 2.9e-55 219.2 142 69.0
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 8.4e-55 217.6 145 69.7
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.1e-54 217.2 162 66.0
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 1.4e-54 216.9 145 69.7
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 4.2e-54 215.3 147 69.4
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 5.4e-54 214.9 145 68.3
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 5.4e-54 214.9 154 66.2
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 1.6e-53 213.4 147 66.7
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 2.1e-53 213.0 145 66.9
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 2.7e-53 212.6 145 66.9
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 2.7e-53 212.6 144 69.4
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 4.6e-53 211.8 147 65.3
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 1.3e-52 210.3 147 64.6
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 1.7e-52 209.9 153 63.4
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 2.3e-52 209.5 131 77.9
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 3.0e-52 209.1 147 65.3
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 3.0e-52 209.1 147 65.3
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 1.1e-51 207.2 146 64.4
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 3.3e-51 205.7 127 80.3
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.1e-50 203.0 146 65.8
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 4.0e-49 198.7 147 61.9
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 3.4e-48 195.7 147 60.5
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.2e-47 193.0 145 61.4
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 6.4e-47 191.4 145 63.4
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.3e-44 183.0 153 59.5
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 4.8e-42 175.3 150 55.3
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 5.3e-41 171.8 99 80.8
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 1.2e-40 170.6 116 73.3
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.3e-39 167.2 131 57.3
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 6.4e-39 164.9 148 51.4
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 8.4e-39 164.5 146 49.3
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.0e-36 157.5 147 49.7
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 1.3e-36 157.1 144 54.9
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.8e-33 146.7 98 68.4
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.8e-33 146.7 143 53.8
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 3.1e-33 146.0 145 52.4
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 3.1e-33 146.0 132 58.3
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 4.9e-31 138.7 145 49.0
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.2e-29 134.0 96 63.5
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 2.6e-24 116.3 142 42.3
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 2.2e-23 113.2 147 44.9
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 2.9e-23 112.8 83 63.9
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 1.4e-22 110.5 85 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 5.1e-20 102.1 84 52.4


User provided reference genes

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