Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 2.5e-98 362.1 179 100.0
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 7.4e-42 174.5 289 42.9
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 5.0e-38 161.8 289 39.4
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 5.5e-37 158.3 289 39.4
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 7.2e-37 157.9 289 38.8
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 7.2e-37 157.9 290 39.0
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 7.2e-37 157.9 290 39.0
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 1.6e-36 156.8 289 38.8
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 2.1e-36 156.4 289 38.8
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 4.7e-36 155.2 289 38.8
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 4.7e-36 155.2 169 52.7
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 6.1e-36 154.8 289 38.4
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 6.1e-36 154.8 289 38.4
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 7.9e-36 154.5 289 38.4
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 1.0e-35 154.1 169 51.5
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 2.3e-35 152.9 169 51.5
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 2.3e-35 152.9 169 51.5
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 2.3e-35 152.9 289 38.1
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 2.3e-35 152.9 289 38.4
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 2.3e-35 152.9 289 38.1
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 2.3e-35 152.9 172 51.2
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 3.0e-35 152.5 169 52.7
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 3.0e-35 152.5 157 55.4
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 3.0e-35 152.5 290 37.9
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 3.0e-35 152.5 290 37.9
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 3.9e-35 152.1 169 52.1
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 5.1e-35 151.8 295 38.0
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 5.1e-35 151.8 289 37.7
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 5.1e-35 151.8 169 52.7
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 5.1e-35 151.8 158 54.4
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 6.7e-35 151.4 158 53.2
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 8.8e-35 151.0 172 51.7
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 8.8e-35 151.0 172 51.7
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 8.8e-35 151.0 172 51.7
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 8.8e-35 151.0 169 51.5
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 8.8e-35 151.0 169 50.9
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 8.8e-35 151.0 169 51.5
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 8.8e-35 151.0 153 56.2
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 1.1e-34 150.6 295 37.6
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 1.1e-34 150.6 169 52.1
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.5e-34 150.2 158 55.1
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.5e-34 150.2 158 55.1
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 2.0e-34 149.8 158 53.8
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 2.6e-34 149.4 172 50.6
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 2.6e-34 149.4 158 53.8
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 3.3e-34 149.1 169 50.9
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 3.3e-34 149.1 169 50.9
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 3.3e-34 149.1 169 50.9
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 4.4e-34 148.7 169 52.7
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 4.4e-34 148.7 172 48.8
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 4.4e-34 148.7 292 38.0
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 5.7e-34 148.3 169 52.7
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 7.4e-34 147.9 169 50.3
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 7.4e-34 147.9 169 50.3
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 7.4e-34 147.9 296 35.8
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 9.7e-34 147.5 169 50.3
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 1.3e-33 147.1 169 50.3
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 1.3e-33 147.1 289 37.0
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 1.3e-33 147.1 169 49.7
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 1.7e-33 146.7 289 37.7
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 3.7e-33 145.6 169 51.5
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 3.7e-33 145.6 294 36.1
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 4.8e-33 145.2 287 37.6
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.1e-32 144.1 169 49.7
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 1.8e-32 143.3 167 50.9
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 1.8e-32 143.3 158 51.9
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 3.1e-32 142.5 165 50.9
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 3.1e-32 142.5 169 51.5
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 4.1e-32 142.1 169 50.3
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 5.3e-32 141.7 172 49.4
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 5.3e-32 141.7 169 49.1
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 7.0e-32 141.4 172 50.0
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 9.1e-32 141.0 172 48.8
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 1.2e-31 140.6 172 48.8
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 1.2e-31 140.6 172 48.8
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 1.2e-31 140.6 172 48.8
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 1.2e-31 140.6 172 47.7
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 1.2e-31 140.6 172 48.3
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 2.0e-31 139.8 169 48.5
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.0e-31 139.8 169 48.5
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 2.0e-31 139.8 169 49.1
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 3.5e-31 139.0 172 48.8
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 3.5e-31 139.0 158 50.6
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 4.5e-31 138.7 158 49.4
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 4.5e-31 138.7 172 48.3
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 7.7e-31 137.9 158 50.6
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 7.7e-31 137.9 158 49.4
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 7.7e-31 137.9 169 49.7
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 7.7e-31 137.9 169 47.9
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 1.3e-30 137.1 172 47.1
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 1.7e-30 136.7 169 47.9
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 2.2e-30 136.3 158 50.0
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 2.2e-30 136.3 158 51.9
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 3.8e-30 135.6 169 46.7
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 6.5e-30 134.8 172 48.8
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 3.2e-29 132.5 289 34.3
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 5.5e-29 131.7 172 46.5
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 9.4e-29 131.0 278 36.7
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 1.2e-28 130.6 169 47.9
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 2.1e-28 129.8 173 46.8
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 2.7e-28 129.4 172 45.9
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 2.7e-28 129.4 268 36.6
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 1.0e-27 127.5 172 45.3
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 1.8e-27 126.7 223 41.7
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 1.8e-27 126.7 173 45.7
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 2.3e-27 126.3 172 45.3
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 1.1e-26 124.0 133 54.1
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 1.7e-25 120.2 169 45.6
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 3.1e-24 115.9 178 42.7
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 2.2e-22 109.8 172 41.9
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 2.9e-22 109.4 161 44.1
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 7.2e-21 104.8 215 39.5
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 1.5e-18 97.1 172 40.1
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 2.6e-18 96.3 158 42.4
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 9.1e-16 87.8 166 39.2
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 7.7e-15 84.7 144 38.9
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 3.2e-13 79.3 202 33.7
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 9.4e-13 77.8 170 31.8
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 5.7e-10 68.6 185 35.1
BcaC02g11579 Brassica carinata HOM05D005754 ORTHO05D006843 9.8e-10 67.8 33 81.8
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 9.8e-10 67.8 62 54.8
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 6.3e-09 65.1 51 60.8
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 6.3e-09 65.1 62 53.2
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 6.3e-09 65.1 122 41.8
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.4e-08 63.9 62 51.6
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 5.4e-08 62.0 62 51.6
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 2.7e-07 59.7 200 31.5


User provided reference genes

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