Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.2e-146 525.0 687 100.0
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.8e-94 351.7 217 84.8
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.1e-91 339.7 217 83.9
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-88 332.4 184 93.5
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 9.6e-88 329.3 253 69.2
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 1.6e-87 328.6 253 70.0
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.0e-81 309.3 202 83.7
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 2.3e-81 308.1 250 68.0
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 3.9e-81 307.4 254 65.4
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 1.1e-80 305.8 248 66.9
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 5.6e-80 303.5 255 63.5
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 2.4e-78 298.1 253 64.8
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.9e-78 296.6 192 81.2
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.4e-77 294.3 151 98.7
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.4e-77 294.3 151 98.7
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 5.8e-77 293.5 255 62.4
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 2.9e-76 291.2 253 61.7
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 2.5e-75 288.1 240 65.8
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 3.2e-75 287.7 254 61.8
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 1.6e-74 285.4 250 63.2
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 3.5e-74 284.3 254 62.2
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 7.4e-72 276.6 255 61.2
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 2.4e-70 271.6 249 61.8
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 4.1e-70 270.8 254 57.1
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 2.0e-69 268.5 184 73.9
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 4.5e-69 267.3 250 61.2
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 7.6e-69 266.5 243 58.8
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 1.7e-68 265.4 210 64.8
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 3.8e-68 264.2 228 61.0
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 6.5e-68 263.5 246 58.5
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 8.4e-68 263.1 251 56.2
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.9e-67 261.9 251 55.8
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 1.2e-66 259.2 248 58.1
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.6e-66 258.8 198 66.7
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 2.7e-66 258.1 199 69.3
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 2.7e-66 258.1 266 56.0
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 7.9e-66 256.5 202 64.9
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 1.0e-65 256.1 245 57.6
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 2.3e-65 255.0 249 55.4
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 8.7e-65 253.1 255 56.5
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.1e-64 252.7 196 65.8
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.1e-64 252.7 249 54.2
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 1.1e-64 252.7 179 73.7
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 1.5e-64 252.3 196 65.3
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 1.9e-64 251.9 275 53.5
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 2.5e-64 251.5 196 65.8
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 3.3e-64 251.1 289 51.6
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 4.3e-64 250.8 195 64.6
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 1.3e-63 249.2 256 56.2
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 4.8e-63 247.3 200 65.5
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 4.8e-63 247.3 203 65.5
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 1.4e-62 245.7 184 68.5
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 2.4e-62 245.0 198 61.6
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 2.4e-62 245.0 200 62.0
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.5e-61 242.3 184 74.5
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 2.0e-61 241.9 245 55.1
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 5.9e-61 240.4 255 54.1
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 7.7e-61 240.0 175 69.7
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 2.2e-60 238.4 199 62.8
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 3.8e-60 237.7 225 59.1
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 5.0e-60 237.3 201 64.7
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 8.5e-60 236.5 198 63.1
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 8.5e-60 236.5 197 65.0
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 1.1e-59 236.1 258 52.7
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 5.5e-59 233.8 181 65.7
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 9.4e-59 233.0 175 69.1
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.2e-58 232.6 204 63.2
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 2.1e-58 231.9 196 62.2
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 2.3e-57 228.4 203 57.6
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 3.0e-57 228.0 180 64.4
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 3.3e-56 224.6 238 54.6
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 7.4e-56 223.4 261 51.0
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 2.2e-55 221.9 261 50.2
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 2.2e-55 221.9 209 56.9
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 2.8e-55 221.5 258 50.4
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 6.3e-55 220.3 216 56.0
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 8.2e-55 219.9 254 51.2
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 3.1e-54 218.0 205 58.0
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 1.2e-53 216.1 259 49.4
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.5e-53 214.2 135 83.0
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 1.3e-52 212.6 201 56.2
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 2.9e-52 211.5 199 57.8
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 2.9e-52 211.5 208 56.7
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 1.0e-49 203.0 237 51.9
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 3.7e-47 194.5 224 52.2
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.6e-45 189.1 174 59.8
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 2.6e-45 188.3 125 76.0
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 4.5e-45 187.6 120 78.3
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 3.8e-44 184.5 125 75.2
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 2.5e-43 181.8 160 58.1
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 1.0e-41 176.4 228 46.9
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 1.0e-41 176.4 214 50.0
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 1.0e-41 176.4 214 48.1
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 8.8e-41 173.3 229 48.9
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 2.6e-40 171.8 212 50.0
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 1.7e-39 169.1 112 75.9
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 2.2e-39 168.7 222 48.6
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 3.7e-39 167.9 196 52.0
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 1.1e-38 166.4 211 49.3
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 1.1e-38 166.4 211 49.3
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 1.8e-38 165.6 181 52.5
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 2.4e-38 165.2 218 50.0
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 7.0e-38 163.7 107 74.8
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 2.0e-37 162.2 139 61.9
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 4.5e-37 161.0 179 50.8
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 4.2e-35 154.5 208 49.5
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 2.1e-34 152.1 215 46.5
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 2.3e-33 148.7 212 42.5
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 4.0e-33 147.9 212 42.0
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 2.6e-32 145.2 211 46.9
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 4.4e-32 144.4 214 45.3
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 9.8e-32 143.3 126 58.7
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.1e-30 139.8 131 55.0
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 5.9e-29 134.0 136 49.3
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 1.1e-27 129.8 129 51.2
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 3.2e-27 128.3 138 55.1
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 4.0e-25 121.3 168 44.6
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 3.4e-24 118.2 209 39.7
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 8.3e-23 113.6 111 56.8
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 2.8e-18 98.6 130 43.8
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.4e-14 86.3 41 95.1
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 1.0e-12 80.1 61 63.9
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 1.6e-10 72.8 151 39.7
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 1.4e-09 69.7 43 81.4
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 4.9e-07 61.2 108 31.5


User provided reference genes

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