Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.3e-50 201.8 94 100.0
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.6e-49 197.2 94 97.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 8.1e-40 166.8 91 79.1
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 4.5e-38 161.0 90 76.7
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.3e-37 159.5 92 75.0
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.2e-37 158.7 90 76.7
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.4e-36 156.0 90 74.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.4e-36 155.2 85 81.2
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 4.2e-36 154.5 91 73.6
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.2e-35 152.9 90 75.6
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 2.1e-35 152.1 90 72.2
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.6e-35 151.0 90 72.2
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.6e-35 151.0 90 72.2
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.0e-34 149.8 88 73.9
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.0e-34 149.8 90 71.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.0e-34 149.8 90 71.1
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.3e-34 149.4 91 69.2
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.3e-34 149.4 89 70.8
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.3e-34 148.7 90 66.7
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 2.3e-34 148.7 90 66.7
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 6.7e-34 147.1 91 67.0
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 8.7e-34 146.7 90 70.0
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 3.3e-33 144.8 90 67.8
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.3e-33 144.8 90 65.6
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 4.3e-33 144.4 90 66.7
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 5.6e-33 144.1 90 66.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 5.6e-33 144.1 90 65.6
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 7.4e-33 143.7 90 63.3
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.4e-33 143.7 90 65.6
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 9.6e-33 143.3 91 65.9
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 9.6e-33 143.3 90 66.7
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.1e-32 142.1 90 64.4
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.1e-32 142.1 90 64.4
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.1e-32 142.1 90 65.6
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.8e-32 141.7 90 64.4
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 2.8e-32 141.7 89 67.4
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.8e-32 141.0 90 65.6
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 8.1e-32 140.2 90 62.2
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.4e-31 139.4 90 63.3
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.4e-31 139.4 90 63.3
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.3e-31 137.5 87 72.4
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 6.9e-31 137.1 89 62.9
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 6.9e-31 137.1 89 62.9
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 6.9e-31 137.1 91 61.5
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 9.0e-31 136.7 90 64.4
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-30 136.3 89 61.8
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.5e-30 136.0 90 62.2
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.6e-30 135.2 90 64.4
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 3.4e-30 134.8 89 62.9
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.4e-30 134.8 91 60.4
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 3.4e-30 134.8 90 63.3
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.5e-30 134.4 84 72.6
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 7.6e-30 133.7 89 61.8
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.6e-30 133.7 90 61.1
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 7.6e-30 133.7 90 61.1
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 9.9e-30 133.3 90 63.3
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 9.9e-30 133.3 90 60.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.3e-29 132.9 90 60.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.3e-29 132.9 91 60.4
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 1.3e-29 132.9 90 60.0
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.7e-29 132.5 82 64.6
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.2e-29 132.1 90 62.2
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 4.9e-29 131.0 62 85.5
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 4.9e-29 131.0 89 60.7
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.4e-28 129.4 89 58.4
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.4e-28 129.4 68 73.5
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 4.2e-28 127.9 89 62.9
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 5.5e-28 127.5 92 56.5
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 7.1e-28 127.1 89 62.9
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.2e-27 126.3 91 59.3
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.7e-27 125.2 89 58.4
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.6e-27 124.4 87 59.8
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-26 122.9 75 70.7
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 3.9e-26 121.3 77 66.2
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 5.1e-26 120.9 89 58.4
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.1e-25 119.8 90 55.6
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.5e-25 119.4 90 57.8
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.9e-25 119.0 90 56.7
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.9e-25 119.0 90 56.7
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.9e-25 119.0 78 64.1
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 4.3e-25 117.9 85 58.8
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 9.6e-25 116.7 89 56.2
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.1e-24 115.5 88 54.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 4.8e-24 114.4 95 52.6
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 4.8e-24 114.4 95 52.6
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 8.2e-24 113.6 77 61.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 1.1e-23 113.2 87 56.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 1.1e-23 113.2 87 56.3
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.4e-23 112.1 89 55.1
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.1e-23 111.7 90 50.0
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 4.0e-23 111.3 63 69.8
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 9.0e-23 110.2 87 57.5
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 2.0e-22 109.0 91 53.8
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 2.6e-22 108.6 85 55.3
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.6e-22 108.6 109 46.8
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 3.4e-22 108.2 72 65.3
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.3e-21 106.3 86 53.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.7e-21 105.9 64 73.4
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 2.9e-21 105.1 88 51.1
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 4.9e-21 104.4 79 51.9
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 8.4e-21 103.6 89 49.4
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.3e-18 96.3 94 45.7
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 3.0e-18 95.1 53 69.8
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.1e-17 93.2 86 46.5
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 3.3e-17 91.7 77 50.6
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 7.4e-17 90.5 51 68.6
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 2.4e-15 85.5 46 76.1
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 7.2e-12 73.9 78 42.3
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 9.4e-12 73.6 89 39.3
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 4.3e-09 64.7 83 34.9


User provided reference genes

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