Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.4e-239 831.2 412 100.0
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 9.6e-178 627.1 413 76.3
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 5.3e-176 621.3 416 77.6
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 9.0e-176 620.5 404 77.0
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 3.7e-169 598.6 414 73.7
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 4.1e-168 595.1 413 72.9
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.6e-164 583.2 415 72.5
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 2.1e-164 582.8 403 71.2
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 6.7e-163 577.8 398 72.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.5e-162 576.6 413 70.0
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 4.3e-162 575.1 408 72.1
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.3e-161 573.5 390 72.3
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.6e-161 573.2 382 73.0
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.2e-161 572.8 380 73.9
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.1e-160 568.9 387 73.6
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 6.9e-160 567.8 408 69.1
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.0e-158 563.9 377 73.2
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.3e-158 563.5 397 72.5
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.5e-157 559.3 411 68.9
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 4.2e-157 558.5 415 68.2
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.7e-156 555.8 406 70.0
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 7.9e-156 554.3 417 67.6
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.8e-155 553.1 406 69.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.0e-155 552.4 395 69.4
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 3.0e-155 552.4 390 71.0
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 8.8e-155 550.8 401 68.8
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.4e-154 547.7 419 66.1
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.8e-153 545.8 413 67.8
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.7e-153 545.4 440 64.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.1e-152 543.9 404 67.8
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 9.1e-152 540.8 386 68.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 3.4e-151 538.9 391 67.3
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 7.7e-151 537.7 413 64.9
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 2.9e-150 535.8 413 67.1
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 5.0e-150 535.0 382 69.6
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 8.5e-150 534.3 417 66.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.1e-149 533.9 413 64.6
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 7.2e-149 531.2 404 66.1
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 6.7e-147 524.6 373 69.7
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 8.8e-147 524.2 412 64.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 2.0e-146 523.1 414 64.5
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.6e-146 522.7 413 64.6
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.8e-145 519.2 415 64.6
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.1e-144 517.3 398 67.1
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.4e-144 516.9 382 67.5
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 9.1e-144 514.2 418 63.2
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.2e-143 513.8 412 64.1
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.0e-143 513.1 412 63.8
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 2.6e-143 512.7 384 67.2
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 5.9e-143 511.5 419 62.5
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 5.9e-143 511.5 412 62.4
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 7.7e-143 511.1 410 63.7
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 7.7e-143 511.1 417 62.4
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.0e-142 510.8 413 62.5
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.2e-142 509.6 392 65.1
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 2.9e-142 509.2 412 62.1
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 8.5e-142 507.7 433 61.9
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.1e-141 507.3 376 65.2
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.5e-141 506.9 387 68.7
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 3.2e-141 505.8 390 64.4
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 3.2e-141 505.8 407 62.4
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.3e-139 499.6 380 65.8
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 6.3e-137 491.5 419 62.1
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.1e-136 490.7 412 60.4
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.4e-136 490.3 419 61.8
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.4e-136 490.3 419 61.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 4.1e-136 488.8 414 63.3
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 5.3e-136 488.4 362 66.6
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.6e-135 486.9 379 65.7
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.6e-135 486.9 457 57.5
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.6e-135 486.9 336 70.5
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 7.7e-135 484.6 372 64.5
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.2e-132 477.2 456 57.0
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-130 470.3 404 60.4
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 2.6e-130 469.5 418 60.0
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.7e-129 466.8 380 60.8
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 6.3e-129 464.9 404 59.2
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 7.5e-122 441.4 298 70.5
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 8.3e-121 438.0 417 55.2
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.0e-120 434.9 295 71.5
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.2e-119 434.1 394 56.3
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 6.1e-116 421.8 286 70.6
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 8.0e-116 421.4 298 67.4
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 4.4e-114 415.6 388 55.4
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.4e-112 409.8 289 68.9
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 2.1e-108 396.7 298 65.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 4.7e-100 369.0 296 58.4
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 5.8e-98 362.1 291 65.3
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 6.8e-91 338.6 231 71.9
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.3e-86 323.6 259 62.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.9e-85 320.5 157 98.7
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.5e-85 320.1 262 59.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.1e-84 317.0 230 69.1
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.8e-83 313.9 388 47.2
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 4.9e-81 305.8 266 58.6
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 3.0e-78 296.6 263 59.3
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 3.8e-65 253.1 377 39.3
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.4e-64 251.1 201 63.2
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.5e-63 246.5 147 86.4
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.9e-56 224.2 189 61.4
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.6e-47 193.4 141 67.4
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 3.1e-43 180.3 412 32.8
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.4e-40 171.4 134 59.0
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.1e-29 135.2 111 62.2
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 5.0e-25 119.8 111 57.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 7.2e-24 115.9 111 54.1
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.0e-22 112.1 88 62.5
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 5.2e-22 109.8 396 27.8
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.5e-21 108.2 140 42.9
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 5.3e-19 99.8 393 28.5
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 7.0e-19 99.4 351 28.2
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.3e-17 95.1 372 25.3
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 4.0e-14 83.6 67 64.2
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 8.8e-14 82.4 68 60.3
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 8.3e-12 75.9 123 35.0
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.3e-09 68.6 72 41.7
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 2.2e-09 67.8 52 71.2
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 4.0e-06 57.0 76 42.1


User provided reference genes

Program Settings